ON007052: eeg dataset, 288 subjects#
PURSUE N400 Word Processing
Access recordings and metadata through EEGDash.
Citation: Couperus, J.W., Bukach, C.M., Reed, C.L. (2021). PURSUE N400 Word Processing. 10.82901/nemar.on007052
Modality: eeg Subjects: 288 Recordings: 288 License: CC0 Source: nemar
Metadata: Complete (100%)
288-participant EEG dataset — PURSUE N400 Word Processing.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import ON007052
dataset = ON007052(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = ON007052(cache_dir="./data", subject="01")
Advanced query
dataset = ON007052(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{on007052,
title = {PURSUE N400 Word Processing},
author = {Couperus, J.W. and Bukach, C.M. and Reed, C.L.},
doi = {10.82901/nemar.on007052},
url = {https://doi.org/10.82901/nemar.on007052},
}
About This Dataset#
Word Processing Task from the PURSUE project (pursureerp.com). Data collected from participants at 3 different primarily undergraduate academic institutions (Southern California, Massachusetts, and Virginia) in 2017 and 2018. The task design can be found in the publication by Kappenman et al.(2021). ERP CORE: An open resource for human event-related potential research. NeuroImage, 225, 117465. Details of task are found in the supplementary materials.
- Race Key:
- “Levels”: {
“x1”: “White”, “x2”: “Black/African American”, “x3”: “Native American”, “x4”: “Asian”, “x5”: “Pacific Islander”, “x6”: “Hispanic/Latino”, “x7”: “Other”, “x8”: “Prefer not to respond”, “x9”: “Chose more than one response”, “” : “empty” }
README
Cohort#
Dataset Statistics#
Age distribution (n=287, range 18–33 yr, mean 19.6 yr · sex per subject not reported)
Sex composition
Channel counts: 32 ch (n=288 recordings)
Sampling frequencies: 500.0 Hz (n=288 recordings)
Total recording duration: 40 h
Signal · Electrodes & live trace#
Live trace viewer — sub-3072 · task-WordPR
Showing one representative recording out of
288 subjects and 288 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
No scalp electrode layout is currently indexed for this dataset. Once the eegdash montage registry ingests it, the interactive viewer will appear here automatically.
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
PURSUE N400 Word Processing |
Author (year) |
— |
Canonical |
— |
Importable as |
|
Year |
2021 |
Authors |
Couperus, J.W., Bukach, C.M., Reed, C.L. |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{on007052,
title = {PURSUE N400 Word Processing},
author = {Couperus, J.W. and Bukach, C.M. and Reed, C.L.},
doi = {10.82901/nemar.on007052},
url = {https://doi.org/10.82901/nemar.on007052},
}
API Reference#
eegdash.datasetEEGDashDataset- class eegdash.dataset.ON007052(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
PURSUE N400 Word Processing
- Study:
on007052(NeMAR)- Author (year):
—
- Canonical:
—
Also importable as:
ON007052.Modality:
eeg; Subject type:Unknown. Subjects: 288; recordings: 288; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/on007052 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=on007052 DOI: https://doi.org/10.82901/nemar.on007052
Examples
>>> from eegdash.dataset import ON007052 >>> dataset = ON007052(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorch
Find datasets with the EEGDash APIQuery the catalogue, filter by task or modality, list candidates.
Load one EEG recordingResolve a single record to an MNE Raw with channels and events.
EEG recording to PyTorch DataLoaderWrap braindecode windows in a DataLoader for model training.
Preprocess EEG and create windowsFilter, resample, epoch — and persist the windowed dataset.
Save and reload prepared dataCache a windowed dataset to disk and reattach it without recompute.
Download a dataset locallyPrefetch BIDS files to a local cache and validate the layout.Swap any load_dataset(...) call for on007052 to reproduce the tutorial on this dataset.
Citation
Couperus, J.W., Bukach, C.M., Reed, C.L. (2021). PURSUE N400 Word Processing. 10.82901/nemar.on007052
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.82901/nemar.on007052.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset