NM000146: eeg dataset, 10 subjects#
Motor Imagery dataset from Weibo et al 2014
Access recordings and metadata through EEGDash.
Citation: Weibo Yi, Shuang Qiu, Kun Wang, Hongzhi Qi, Lixin Zhang, Peng Zhou, Feng He, Dong Ming (2014). Motor Imagery dataset from Weibo et al 2014. 10.82901/nemar.nm000146
Modality: eeg Subjects: 10 Recordings: 10 License: CC0-1.0 Source: nemar
Metadata: Complete (100%)
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000146
dataset = NM000146(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000146(cache_dir="./data", subject="01")
Advanced query
dataset = NM000146(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000146,
title = {Motor Imagery dataset from Weibo et al 2014},
author = {Weibo Yi and Shuang Qiu and Kun Wang and Hongzhi Qi and Lixin Zhang and Peng Zhou and Feng He and Dong Ming},
doi = {10.82901/nemar.nm000146},
url = {https://doi.org/10.82901/nemar.nm000146},
}
About This Dataset#
Motor Imagery dataset from Weibo et al 2014
Motor Imagery dataset from Weibo et al 2014.
Dataset Overview
Code: Weibo2014
Paradigm: imagery
View full README
Motor Imagery dataset from Weibo et al 2014
Motor Imagery dataset from Weibo et al 2014.
Dataset Overview
Code: Weibo2014
Paradigm: imagery
DOI: 10.1371/journal.pone.0114853
Subjects: 10
Sessions per subject: 1
Events: left_hand=1, right_hand=2, hands=3, feet=4, left_hand_right_foot=5, right_hand_left_foot=6, rest=7
Trial interval: [3, 7] s
File format: MAT
Data preprocessed: True
Acquisition
Sampling rate: 200.0 Hz
Number of channels: 60
Channel types: eeg=60, eog=2, misc=2
Channel names: AF3, AF4, C1, C2, C3, C4, C5, C6, CB1, CB2, CP1, CP2, CP3, CP4, CP5, CP6, CPz, Cz, F1, F2, F3, F4, F5, F6, F7, F8, FC1, FC2, FC3, FC4, FC5, FC6, FCz, FT7, FT8, Fp1, Fp2, Fpz, Fz, HEO, O1, O2, Oz, P1, P2, P3, P4, P5, P6, P7, P8, PO3, PO4, PO5, PO6, PO7, PO8, POz, Pz, T7, T8, TP7, TP8, VEO
Montage: standard_1005
Hardware: Neuroscan SynAmps2
Reference: nose
Ground: prefrontal lobe
Sensor type: Ag/AgCl
Line frequency: 50.0 Hz
Online filters: {‘bandpass’: [0.5, 100], ‘notch_hz’: 50}
Auxiliary channels: EOG (2 ch, HEO, VEO)
Participants
Number of subjects: 10
Health status: healthy
Age: mean=24.0, min=23.0, max=25.0
Gender distribution: female=7, male=3
Handedness: right-handed
BCI experience: naive
Species: human
Experimental Protocol
Paradigm: imagery
Number of classes: 7
Class labels: left_hand, right_hand, hands, feet, left_hand_right_foot, right_hand_left_foot, rest
Trial duration: 8.0 s
Study design: Simple limb motor imagery (left hand, right hand, feet) and compound limb motor imagery (both hands, left hand combined with right foot, right hand combined with left foot)
Feedback type: none
Stimulus type: text cues
Stimulus modalities: visual
Primary modality: visual
Synchronicity: synchronous
Mode: offline
Instructions: Participants were asked to perform kinesthetic motor imagery rather than a visual type of imagery while avoiding any muscle movement
HED Event Annotations
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser
left_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Left, Hand
right_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Right, Hand
hands
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine, Move, Hand
feet
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine, Move, Foot
left_hand_right_foot
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
├─ Imagine
│ ├─ Move
│ └─ Left, Hand
└─ Imagine
├─ Move
└─ Right, Foot
right_hand_left_foot
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
├─ Imagine
│ ├─ Move
│ └─ Right, Hand
└─ Imagine
├─ Move
└─ Left, Foot
rest
├─ Sensory-event
├─ Experimental-stimulus
├─ Visual-presentation
└─ Rest
Paradigm-Specific Parameters
Detected paradigm: motor_imagery
Imagery tasks: left_hand, right_hand, feet, both_hands, left_hand_right_foot, right_hand_left_foot
Cue duration: 1.0 s
Imagery duration: 4.0 s
Data Structure
Trials: 560
Trials context: 8 sections with 60 trials each (10 trials per MI task per section) for 6 MI tasks, plus 1 section with 80 trials for rest state
Preprocessing
Data state: preprocessed
Preprocessing applied: True
Steps: bandpass filtering, downsampling
Highpass filter: 0.5 Hz
Lowpass filter: 50.0 Hz
Bandpass filter: {‘low_cutoff_hz’: 0.5, ‘high_cutoff_hz’: 50.0}
Re-reference: nose
Downsampled to: 200.0 Hz
Signal Processing
Feature extraction: Bandpower, ERD, ERS, ERSP, Time-Frequency, AR, DTF, PLV
Frequency bands: theta=[4.0, 5.0] Hz; alpha=[8.0, 13.0] Hz; beta=[13.0, 30.0] Hz; analyzed=[1.0, 40.0] Hz
BCI Application
Applications: motor_control
Environment: laboratory
Tags
Pathology: Healthy
Modality: Motor
Type: Research
Documentation
DOI: 10.1371/journal.pone.0114853
License: CC0-1.0
Investigators: Weibo Yi, Shuang Qiu, Kun Wang, Hongzhi Qi, Lixin Zhang, Peng Zhou, Feng He, Dong Ming
Senior author: Dong Ming
Contact: qhz@tju.edu.cn; richardming@tju.edu.cn
Institution: Tianjin University
Department: Department of Biomedical Engineering
Country: CN
Repository: Harvard Dataverse Database
Data URL: http://dx.doi.org/10.7910/DVN/27306
Publication year: 2014
Funding: National Natural Science Foundation of China (No. 81222021, 61172008, 81171423, 51377120, 31271062); National Key Technology R&D Program of the Ministry of Science and Technology of China (No. 2012BAI34B02); Program for New Century Excellent Talents in University of the Ministry of Education of China (No. NCET-10-0618); Natural Science Foundation of Tianjin (No. 13JCQNJC13900)
Ethics approval: Ethical committee of Tianjin University
Keywords: motor imagery, compound limb motor imagery, EEG oscillatory patterns, cognitive process, effective connectivity, ERD, ERS
References
Yi, Weibo, et al. “Evaluation of EEG oscillatory patterns and cognitive process during simple and compound limb motor imagery.” PloS one 9.12 (2014). https://doi.org/10.1371/journal.pone.0114853 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Dataset Information#
Dataset ID |
|
Title |
Motor Imagery dataset from Weibo et al 2014 |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2014 |
Authors |
Weibo Yi, Shuang Qiu, Kun Wang, Hongzhi Qi, Lixin Zhang, Peng Zhou, Feng He, Dong Ming |
License |
CC0-1.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000146,
title = {Motor Imagery dataset from Weibo et al 2014},
author = {Weibo Yi and Shuang Qiu and Kun Wang and Hongzhi Qi and Lixin Zhang and Peng Zhou and Feng He and Dong Ming},
doi = {10.82901/nemar.nm000146},
url = {https://doi.org/10.82901/nemar.nm000146},
}
Found an issue with this dataset?
If you encounter any problems with this dataset (missing files, incorrect metadata, loading errors, etc.), please let us know!
Technical Details#
Subjects: 10
Recordings: 10
Tasks: 1
Channels: 60
Sampling rate (Hz): 200.0
Duration (hours): 13.080541666666663
Pathology: Healthy
Modality: Visual
Type: Motor
Size on disk: 1.6 GB
File count: 10
Format: BIDS
License: CC0-1.0
DOI: 10.82901/nemar.nm000146
Electrode Layout#
Electrode layout — EEG · 60 sensors — 60 channels
Dataset Statistics#
Age distribution (n=10, range 24–24 yr)
Channel counts: 60 ch (n=10 recordings)
Sampling frequencies: 200.0 Hz (n=10 recordings)
Total recording duration: 13 h 4 min
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
API Reference#
Use the NM000146 class to access this dataset programmatically.
- class eegdash.dataset.NM000146(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Bases:
EEGDashDatasetMotor Imagery dataset from Weibo et al 2014
- Study:
nm000146(NeMAR)- Author (year):
Yi2014- Canonical:
—
Also importable as:
NM000146,Yi2014.Modality:
eeg; Experiment type:Motor; Subject type:Healthy. Subjects: 10; recordings: 10; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000146 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000146 DOI: https://doi.org/10.82901/nemar.nm000146
Examples
>>> from eegdash.dataset import NM000146 >>> dataset = NM000146(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset