NM000209: eeg dataset, 25 subjects#
Motor imagery + spatial attention dataset from Forenzo & He 2023
Citation: Dylan Forenzo, Yixuan Liu, Jeehyun Kim, Yidan Ding, Taehyung Yoon, Bin He (2024). Motor imagery + spatial attention dataset from Forenzo & He 2023.
25-participant EEG dataset — Motor imagery + spatial attention dataset from Forenzo & He 2023.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000209
dataset = NM000209(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000209(cache_dir="./data", subject="01")
Advanced query
dataset = NM000209(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000209,
title = {Motor imagery + spatial attention dataset from Forenzo & He 2023},
author = {Dylan Forenzo and Yixuan Liu and Jeehyun Kim and Yidan Ding and Taehyung Yoon and Bin He},
}
About This Dataset#
Motor imagery + spatial attention dataset from Forenzo & He 2023.
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser
Motor imagery + spatial attention dataset from Forenzo & He 2023
left_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
View full README
Motor imagery + spatial attention dataset from Forenzo & He 2023
left_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Left, Hand
right_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Right, Hand
Paradigm-Specific Parameters
Detected paradigm: motor_imagery
Imagery tasks: left_hand, right_hand
Imagery duration: 6.0 s
Data Structure
Trials: 1875
Trials context: 25 subjects x 5 sessions x 3 MI runs x 5 trials
Signal Processing
Classifiers: linear_classifier
Feature extraction: AR_spectral_estimation, alpha_bandpower
Frequency bands: alpha=[8.0, 13.0] Hz
Spatial filters: Laplacian
Cross-Validation
Evaluation type: within_subject
BCI Application
Applications: cursor_control
Environment: laboratory
Online feedback: True
Tags
Pathology: Healthy
Modality: Motor
Type: Research
Documentation
DOI: 10.1109/TBME.2023.3298957
License: CC-BY-4.0
Investigators: Dylan Forenzo, Yixuan Liu, Jeehyun Kim, Yidan Ding, Taehyung Yoon, Bin He
Institution: Carnegie Mellon University
Department: Department of Biomedical Engineering
Country: US
Publication year: 2023
References
Forenzo, D., & He, B. (2024). Integrating simultaneous motor imagery and spatial attention for EEG-BCI control. IEEE Trans. Biomed. Eng., 71(1), 282-294. https://doi.org/10.1109/TBME.2023.3298957 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Cohort#
Dataset Statistics#
Age distribution by gender (n=25, range 26–26 yr, mean 25.0 yr)
Channel counts: 64 ch (n=150 recordings)
Sampling frequencies: 1000.0 Hz (n=150 recordings)
Total recording duration: 7 h 34 min
Signal · Electrodes & live trace#
Live trace viewer — sub-13 · ses-0 · task-imagery · run-2
Showing one representative recording out of
25 subjects and 150 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 62 sensors — 62 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
Motor imagery + spatial attention dataset from Forenzo & He 2023 |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2024 |
Authors |
Dylan Forenzo, Yixuan Liu, Jeehyun Kim, Yidan Ding, Taehyung Yoon, Bin He |
License |
CC-BY-4.0 |
Citation / DOI |
Unknown |
Source links |
OpenNeuro | NeMAR | Source URL |
API Reference#
eegdash.datasetEEGDashDatasetNM000209 · Forenzo2023eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.NM000209(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Motor imagery + spatial attention dataset from Forenzo & He 2023
- Study:
nm000209(NeMAR)- Author (year):
Forenzo2023- Canonical:
—
Also importable as:
NM000209,Forenzo2023.Modality:
eeg; Experiment type:Motor; Subject type:Healthy. Subjects: 25; recordings: 150; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000209 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000209
Examples
>>> from eegdash.dataset import NM000209 >>> dataset = NM000209(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000209 to reproduce the tutorial on this dataset.
Citation
Dylan Forenzo, Yixuan Liu, Jeehyun Kim, Yidan Ding, Taehyung Yoon, … (2024). Motor imagery + spatial attention dataset from Forenzo & He 2023.
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset