NM000138: eeg dataset, 8 subjects#
Alex Motor Imagery dataset
Citation: Alexandre Barachant (2019). Alex Motor Imagery dataset. 10.82901/nemar.nm000138
8-participant EEG dataset — Alex Motor Imagery dataset.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000138
dataset = NM000138(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000138(cache_dir="./data", subject="01")
Advanced query
dataset = NM000138(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000138,
title = {Alex Motor Imagery dataset},
author = {Alexandre Barachant},
doi = {10.82901/nemar.nm000138},
url = {https://doi.org/10.82901/nemar.nm000138},
}
About This Dataset#
Alex Motor Imagery dataset.
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser
Alex Motor Imagery dataset
right_hand
View full README
Alex Motor Imagery dataset
right_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Right, Hand
feet
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine, Move, Foot
rest
├─ Sensory-event
├─ Experimental-stimulus
├─ Visual-presentation
└─ Rest
Paradigm-Specific Parameters
Detected paradigm: motor_imagery
Imagery tasks: right_hand, feet, rest
Cue duration: 1.0 s
Imagery duration: 3.0 s
Data Structure
Trials: 60
Trials per class: right_hand=20, feet=20, rest=20
Trials context: 20 trials per class, 3 second duration each
Preprocessing
Re-reference: earlobe
Signal Processing
Classifiers: LDA, SVM, MDM, Riemannian, kNN, Naive Bayes, Logistic Regression
Feature extraction: CSP, FBCSP, ERD, ERS, PSD, Covariance/Riemannian, AR, ICA
Frequency bands: alpha=[8.0, 12.0] Hz; mu=[8.0, 12.0] Hz
Spatial filters: CSP, Geodesic filtering
Cross-Validation
Method: cross-validation
Evaluation type: within_session
BCI Application
Applications: motor_control
Environment: laboratory
Online feedback: False
Tags
Pathology: Healthy
Modality: Motor
Type: Research
Documentation
Description: Motor imagery dataset from the PhD dissertation of A. Barachant. Contains EEG recordings from 8 subjects performing motor imagination tasks (right hand, feet, or rest). Used to validate robust control of an effector via asynchronous EEG-based brain-machine interface.
DOI: 10.5281/zenodo.806022
Associated paper DOI: tel-01196752v1
License: CC-BY-SA-4.0
Investigators: Alexandre Barachant
Senior author: Alexandre Barachant
Contact: alexandre.barachant@gmail.com
Institution: Université de Grenoble
Department: Laboratoire Électronique et système pour la santé CEA-LETI
Address: CEA-LETI Grenoble, France
Country: France
Repository: Zenodo
Data URL: https://zenodo.org/record/806023
Publication year: 2012
Keywords: brain-computer interface, motor imagery, EEG, Riemannian geometry, asynchronous BCI, brain-switch, covariance matrices, Common Spatial Pattern
Abstract
Motor imagery dataset from the PhD thesis on robust control of an effector via asynchronous EEG brain-machine interface (Barachant, 2012). This shared dataset corresponds to Step B (cue-based imagery without feedback) of the Brain Switch campaign. Contains recordings from 8 subjects performing 3 motor imagery tasks (right hand, feet, rest) with 20 trials per class.
Methodology
Cue-based paradigm without feedback (Step B of Brain Switch campaign). EEG recorded at 512 Hz with 16 active electrodes using a g.tec g.USBamp amplifier. Reference electrode placed on the ear. Subjects performed imagined movements following visual cues: right hand, feet, and rest, 20 trials per class, 3 seconds each. Recorded in standard office conditions (not shielded laboratory). Software: Matlab/Simulink with g.tec drivers.
References
Barachant, A., 2012. Commande robuste d’un effecteur par une interface cerveau machine EEG asynchrone (Doctoral dissertation, Université de Grenoble). https://tel.archives-ouvertes.fr/tel-01196752 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.4.3 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Cohort#
Dataset Statistics#
Channel counts: 16 ch (n=8 recordings)
Sampling frequencies: 512.0 Hz (n=8 recordings)
Total recording duration: 1 h 6 min
Signal · Electrodes & live trace#
Live trace viewer — sub-6 · ses-0 · task-imagery · run-0
Showing one representative recording out of
8 subjects and 8 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 16 sensors — 16 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
Alex Motor Imagery dataset |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2019 |
Authors |
Alexandre Barachant |
License |
CC-BY-SA-4.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000138,
title = {Alex Motor Imagery dataset},
author = {Alexandre Barachant},
doi = {10.82901/nemar.nm000138},
url = {https://doi.org/10.82901/nemar.nm000138},
}
API Reference#
eegdash.datasetEEGDashDatasetNM000138 · Barachant2012eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.NM000138(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Alex Motor Imagery dataset
- Study:
nm000138(NeMAR)- Author (year):
Barachant2012- Canonical:
—
Also importable as:
NM000138,Barachant2012.Modality:
eeg; Experiment type:Motor; Subject type:Healthy. Subjects: 8; recordings: 8; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000138 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000138 DOI: https://doi.org/10.82901/nemar.nm000138
Examples
>>> from eegdash.dataset import NM000138 >>> dataset = NM000138(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000138 to reproduce the tutorial on this dataset.
Citation
Alexandre Barachant (2019). Alex Motor Imagery dataset. 10.82901/nemar.nm000138
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.82901/nemar.nm000138.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset