NM000315: eeg dataset, 10 subjects#
Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings)
Access recordings and metadata through EEGDash.
Citation: Hyonyoung Shin, Daniel Suma, Bin He (2019). Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings). 10.82901/nemar.nm000315
Modality: eeg Subjects: 10 Recordings: 110 License: CC BY 4.0 Source: nemar
Metadata: Complete (100%)
10-participant EEG dataset — Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings).
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000315
dataset = NM000315(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000315(cache_dir="./data", subject="01")
Advanced query
dataset = NM000315(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000315,
title = {Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings)},
author = {Hyonyoung Shin and Daniel Suma and Bin He},
doi = {10.82901/nemar.nm000315},
url = {https://doi.org/10.82901/nemar.nm000315},
}
About This Dataset#
Closed-loop 1D left/right motor imagery EEG dataset (live recordings).
Code: Shin2022
Paradigm: imagery DOI: 10.3389/fnhum.2022.951591 Subjects: 10 Sessions per subject: 1 Events: right_hand=1, left_hand=2 Trial interval: [0, 3.0] s Runs per session: 11 File format: BCI2000
Shin2022
Acquisition
Sampling rate: 250.0 Hz Number of channels: 16 Channel types: eeg=16 Montage: standard_1005
View full README
Shin2022
Acquisition
Sampling rate: 250.0 Hz Number of channels: 16 Channel types: eeg=16 Montage: standard_1005 Hardware: g.tec g.Nautilus RESEARCH (16 channel) Software: BCI2000 Reference: unknown Sensor type: dry Line frequency: 60.0 Hz Online filters: broadband (online 0.5-30 Hz filter disabled at source) Cap manufacturer: g.tec medical engineering GmbH Cap model: g.SAHARA dry electrode system Electrode type: wire
Participants
Number of subjects: 10 Health status: healthy Species: human
Experimental Protocol
Paradigm: imagery Number of classes: 2 Class labels: right_hand, left_hand Trial duration: 6.0 s Study design: Closed-loop 1D left/right (LR) center-out SMR cursor control. Left- vs right-hand motor imagery moves a cursor toward a left or right target under continuous visual feedback. 24 trials per run (12 left / 12 right), 11 runs per subject sweeping online control parameters (BW, CV, NT); one recording day per subject. Feedback type: visual Stimulus type: visual cursor Stimulus modalities: visual Primary modality: visual Synchronicity: synchronous Mode: online Instructions: Imagine left- or right-hand movement to drive the cursor toward the cued left or right target.
HED Event Annotations
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser right_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Right, Hand
left_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Left, Hand
Paradigm-Specific Parameters
Detected paradigm: motor_imagery Imagery tasks: right_hand, left_hand
Data Structure
Trials: 2640 Trials per class: right_hand=12, left_hand=12 Trials context: 10 subjects x 11 runs x 24 trials (12 left / 12 right)
Preprocessing
Data state: continuous
Signal Processing
Feature extraction: autoregressive_spectrum, alpha_band_power Frequency bands: alpha=[8.0, 12.0] Hz Spatial filters: s, m, a, l, l, , s, u, r, f, a, c, e, , L, a, p, l, a, c, i, a, n, , a, r, o, u, n, d, , C, 3, , a, n, d, , C, 4
Cross-Validation
Evaluation type: within_subject
BCI Application
Applications: cursor_control Environment: laboratory Online feedback: True
Tags
Pathology: Healthy Modality: Motor Type: Research
Documentation
DOI: 10.3389/fnhum.2022.951591 Associated paper DOI: 10.3389/fnhum.2022.951591 License: CC BY 4.0 Investigators: Hyonyoung Shin, Daniel Suma, Bin He Senior author: Bin He Institution: Carnegie Mellon University Department: Department of Biomedical Engineering Country: US Repository: Figshare Data URL: https://doi.org/10.6084/m9.figshare.20383716 Publication year: 2022 Keywords: motor imagery, EEG, sensorimotor rhythm, brain-computer interface, closed-loop, cursor control, dry electrodes
References
H. Shin, D. Suma and B. He, “Closed-loop motor imagery EEG simulation for brain-computer interfaces,” Frontiers in Human Neuroscience, vol. 16, 951591, 2022. DOI: 10.3389/fnhum.2022.951591 H. Shin, D. Suma and B. He, “Data from: Closed-loop motor imagery EEG simulation for brain-computer interfaces,” figshare, 2022. DOI: 10.6084/m9.figshare.20383716 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.8.0dev0 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Ethics
Ethics approval: the data analysed in this deposit were collected under the ethics approval obtained by the original investigators and reported in the primary publication cited above (see References/Documentation sections of this README). Participants gave informed consent in the source study. No new human-subject data were collected during this BIDS re-release; this NEMAR record only reformats the published source data into BIDS via MOABB.
Please consult the primary publication for the exact IRB/ethics committee reference.
Ethics
Reviewed and approved by the Institutional Review Board of Carnegie Mellon University. All participants provided written informed consent to participate in the study (Shin, Suma & He 2022, Front. Hum. Neurosci. 16:951591, DOI 10.3389/fnhum.2022.951591).
Verbatim from the source:
The studies involving human participants were reviewed and approved by the Institutional Review Board of Carnegie Mellon University. The patients/participants provided their written informed consent to participate in this study.
Source: cached paper .paper-audit/Shin2022/paper-10_3389_fnhum_2022_951591.txt (Shin, Suma & He 2022, Front. Hum. Neurosci. 16:951591, DOI 10.3389/fnhum.2022.951591).
NEMAR Metadata#
[](https://doi.org/10.82901/nemar.nm000315) Shin2022 ======== Closed-loop 1D left/right motor imagery EEG dataset (live recordings). Dataset Overview —————-
Code: Shin2022 Paradigm: imagery DOI: 10.3389/fnhum.2022.951591 Subjects: 10 Sessions per subject: 1 Events: right_hand=1, left_hand=2 Trial interval: [0, 3.0] s Runs per session: 11 File format: BCI2000
Acquisition#
Sampling rate: 250.0 Hz Number of channels: 16 Channel types: eeg=16 Montage: standard_1005 Hardware: g.tec g.Nautilus RESEARCH (16 channel) Software: BCI2000 Reference: unknown Sensor type: dry Line frequency: 60.0 Hz Online filters: broadband (online 0.5-30 Hz filter disabled at source) Cap manufacturer: g.tec medical engineering GmbH Cap model: g.SAHARA dry electrode system Electrode type: wire
Participants#
Number of subjects: 10 Health status: healthy Species: human
Experimental Protocol#
Paradigm: imagery Number of classes: 2 Class labels: right_hand, left_hand Trial duration: 6.0 s Study design: Closed-loop 1D left/right (LR) center-out SMR cursor control. Left- vs right-hand motor imagery moves a cursor toward a left or right target under continuous visual feedback. 24 trials per run (12 left / 12 right), 11 runs per subject sweeping online control parameters (BW, CV, NT); one recording day per subject. Feedback type: visual Stimulus type: visual cursor Stimulus modalities: visual Primary modality: visual Synchronicity: synchronous Mode: online Instructions: Imagine left- or right-hand movement to drive the cursor toward the cued left or right target.
HED Event Annotations#
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser right_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation └─ Agent-action
- └─ Imagine
├─ Move └─ Right, Hand
- left_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation └─ Agent-action
- └─ Imagine
├─ Move └─ Left, Hand
Paradigm-Specific Parameters#
Detected paradigm: motor_imagery Imagery tasks: right_hand, left_hand
Data Structure#
Trials: 2640 Trials per class: right_hand=12, left_hand=12 Trials context: 10 subjects x 11 runs x 24 trials (12 left / 12 right)
Preprocessing#
Data state: continuous
Signal Processing#
Feature extraction: autoregressive_spectrum, alpha_band_power Frequency bands: alpha=[8.0, 12.0] Hz Spatial filters: s, m, a, l, l, , s, u, r, f, a, c, e, , L, a, p, l, a, c, i, a, n, , a, r, o, u, n, d, , C, 3, , a, n, d, , C, 4
Cross-Validation#
Evaluation type: within_subject
BCI Application#
Applications: cursor_control Environment: laboratory Online feedback: True
Documentation#
DOI: 10.3389/fnhum.2022.951591 Associated paper DOI: 10.3389/fnhum.2022.951591 License: CC BY 4.0 Investigators: Hyonyoung Shin, Daniel Suma, Bin He Senior author: Bin He Institution: Carnegie Mellon University Department: Department of Biomedical Engineering Country: US Repository: Figshare Data URL: https://doi.org/10.6084/m9.figshare.20383716 Publication year: 2022 Keywords: motor imagery, EEG, sensorimotor rhythm, brain-computer interface, closed-loop, cursor control, dry electrodes
References#
H. Shin, D. Suma and B. He, “Closed-loop motor imagery EEG simulation for brain-computer interfaces,” Frontiers in Human Neuroscience, vol. 16, 951591, 2022. DOI: 10.3389/fnhum.2022.951591 H. Shin, D. Suma and B. He, “Data from: Closed-loop motor imagery EEG simulation for brain-computer interfaces,” figshare, 2022. DOI: 10.6084/m9.figshare.20383716 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 — Generated by MOABB 1.8.0dev0 (Mother of All BCI Benchmarks) NeuroTechX/moabb Ethics —— Ethics approval: the data analysed in this deposit were collected under the ethics approval obtained by the original investigators and reported in the primary publication cited above (see References/Documentation sections of this README). Participants gave informed consent in the source study. No new human-subject data were collected during this BIDS re-release; this NEMAR record only reformats the published source data into BIDS via MOABB. Please consult the primary publication for the exact IRB/ethics committee reference. ## Ethics Reviewed and approved by the Institutional Review Board of Carnegie Mellon University. All participants provided written informed consent to participate in the study (Shin, Suma & He 2022, Front. Hum. Neurosci. 16:951591, DOI 10.3389/fnhum.2022.951591). Verbatim from the source: > The studies involving human participants were reviewed and approved by the Institutional Review Board of Carnegie Mellon University. The patients/participants provided their written informed consent to participate in this study. Source: cached paper .paper-audit/Shin2022/paper-10_3389_fnhum_2022_951591.txt (Shin, Suma & He 2022, Front. Hum. Neurosci. 16:951591, DOI 10.3389/fnhum.2022.951591).
License: CC BY 4.0
Authors:
Hyonyoung Shin
Daniel Suma
Bin He
Versions:
Version |
DOI |
Released |
|---|---|---|
|
Cohort#
Dataset Statistics#
Channel counts: 16 ch (n=110 recordings)
Sampling frequencies: 250.0 Hz (n=110 recordings)
Total recording duration: 7 h 28 min
Signal · Electrodes & live trace#
Live trace viewer — sub-7 · ses-0 · task-imagery · run-2
Showing one representative recording out of
10 subjects and 110 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
No scalp electrode layout is currently indexed for this dataset. Once the eegdash montage registry ingests it, the interactive viewer will appear here automatically.
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings) |
Author (year) |
— |
Canonical |
— |
Importable as |
|
Year |
2019 |
Authors |
Hyonyoung Shin, Daniel Suma, Bin He |
License |
CC BY 4.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000315,
title = {Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings)},
author = {Hyonyoung Shin and Daniel Suma and Bin He},
doi = {10.82901/nemar.nm000315},
url = {https://doi.org/10.82901/nemar.nm000315},
}
API Reference#
eegdash.datasetEEGDashDataset- class eegdash.dataset.NM000315(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings)
- Study:
nm000315(NeMAR)- Author (year):
—
- Canonical:
—
Also importable as:
NM000315.Modality:
eeg; Subject type:Unknown. Subjects: 10; recordings: 110; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000315 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000315 DOI: https://doi.org/10.82901/nemar.nm000315
Examples
>>> from eegdash.dataset import NM000315 >>> dataset = NM000315(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000315 to reproduce the tutorial on this dataset.
Citation
Hyonyoung Shin, Daniel Suma, Bin He (2019). Shin2022: Closed-loop 1D left/right motor imagery EEG dataset (live recordings). 10.82901/nemar.nm000315
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.82901/nemar.nm000315.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset