NM000180: eeg dataset, 45 subjects#
Brennan2019: EEG during Alice in Wonderland Listening
Access recordings and metadata through EEGDash.
Citation: Jonathan R. Brennan, John T. Hale (2019). Brennan2019: EEG during Alice in Wonderland Listening. 10.1371/journal.pone.0207741
Modality: eeg Subjects: 45 Recordings: 45 License: CC BY 4.0 Source: nemar
Metadata: Complete (100%)
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000180
dataset = NM000180(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000180(cache_dir="./data", subject="01")
Advanced query
dataset = NM000180(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000180,
title = {Brennan2019: EEG during Alice in Wonderland Listening},
author = {Jonathan R. Brennan and John T. Hale},
doi = {10.1371/journal.pone.0207741},
url = {https://doi.org/10.1371/journal.pone.0207741},
}
About This Dataset#
Brennan2019: EEG during Alice in Wonderland Listening
Overview
EEG recorded from 33 subjects while listening to the first chapter of “Alice’s Adventures in Wonderland” by Lewis Carroll. Naturalistic auditory comprehension paradigm for studying hierarchical linguistic structure processing.
View full README
Brennan2019: EEG during Alice in Wonderland Listening
Overview
EEG recorded from 33 subjects while listening to the first chapter of “Alice’s Adventures in Wonderland” by Lewis Carroll. Naturalistic auditory comprehension paradigm for studying hierarchical linguistic structure processing.
Recording Setup
Channels: 61 EEG + 1 VEOG + 1 audio channel
Sampling rate: 500 Hz
Montage: easycap-M10
Reference: Average reference (offline)
Bandpass: 0.1-200 Hz (online)
Task
Passive listening to continuous naturalistic speech (audiobook). Subjects listened to the full first chapter (~25 minutes).
Reference
Brennan, J.R. & Hale, J.T. (2019). PLoS ONE, 14(1), e0207741.
References
Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Höchenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896).https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103.https://doi.org/10.1038/s41597-019-0104-8
Dataset Information#
Dataset ID |
|
Title |
Brennan2019: EEG during Alice in Wonderland Listening |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2019 |
Authors |
Jonathan R. Brennan, John T. Hale |
License |
CC BY 4.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000180,
title = {Brennan2019: EEG during Alice in Wonderland Listening},
author = {Jonathan R. Brennan and John T. Hale},
doi = {10.1371/journal.pone.0207741},
url = {https://doi.org/10.1371/journal.pone.0207741},
}
Found an issue with this dataset?
If you encounter any problems with this dataset (missing files, incorrect metadata, loading errors, etc.), please let us know!
Technical Details#
Subjects: 45
Recordings: 45
Tasks: 1
Channels: 62
Sampling rate (Hz): 500.0
Duration (hours): 9.154141666666668
Pathology: Not specified
Modality: —
Type: —
Size on disk: 3.8 GB
File count: 45
Format: BIDS
License: CC BY 4.0
DOI: doi:10.1371/journal.pone.0207741
Electrode Layout#
Electrode layout — EEG · 60 sensors — 60 channels
Dataset Statistics#
Channel counts: 62 ch (n=45 recordings)
Sampling frequencies: 500.0 Hz (n=45 recordings)
Total recording duration: 9 h 9 min
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
API Reference#
Use the NM000180 class to access this dataset programmatically.
- class eegdash.dataset.NM000180(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Bases:
EEGDashDatasetBrennan2019: EEG during Alice in Wonderland Listening
- Study:
nm000180(NeMAR)- Author (year):
Brennan2019- Canonical:
—
Also importable as:
NM000180,Brennan2019.Modality:
eeg. Subjects: 45; recordings: 45; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000180 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000180 DOI: https://doi.org/10.1371/journal.pone.0207741
Examples
>>> from eegdash.dataset import NM000180 >>> dataset = NM000180(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset