NM000167: eeg dataset, 25 subjects#
Motor imagery dataset from Ma et al. 2020
Citation: Xuelin Ma, Shuang Qiu, Changde Du, Junfeng Xing, Huiguang He (2019). Motor imagery dataset from Ma et al. 2020. 10.82901/nemar.nm000167
25-participant EEG dataset — Motor imagery dataset from Ma et al. 2020.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000167
dataset = NM000167(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000167(cache_dir="./data", subject="01")
Advanced query
dataset = NM000167(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000167,
title = {Motor imagery dataset from Ma et al. 2020},
author = {Xuelin Ma and Shuang Qiu and Changde Du and Junfeng Xing and Huiguang He},
doi = {10.82901/nemar.nm000167},
url = {https://doi.org/10.82901/nemar.nm000167},
}
About This Dataset#
Motor imagery dataset from Ma et al. 2020.
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser
Motor imagery dataset from Ma et al. 2020
right_hand
View full README
Motor imagery dataset from Ma et al. 2020
right_hand
├─ Sensory-event, Experimental-stimulus, Visual-presentation
└─ Agent-action
└─ Imagine
├─ Move
└─ Right, Hand
right_elbow
├─ Sensory-event
└─ Label/right_elbow
Paradigm-Specific Parameters
Detected paradigm: motor_imagery
Imagery tasks: right_hand, right_elbow
Cue duration: 1.0 s
Imagery duration: 4.0 s
Data Structure
Trials: 600
Trials per class: right_hand=300, right_elbow=300
Blocks per session: 15
Trials context: 3 days x 5 MI sessions/day = 15 sessions, 40 trials/session (20 hand + 20 elbow)
Signal Processing
Classifiers: FBCSP+SVM
Feature extraction: FBCSP
Frequency bands: alpha=[8.0, 13.0] Hz; beta=[20.0, 25.0] Hz
Spatial filters: CAR, FBCSP
Cross-Validation
Method: 5-fold
Folds: 5
Evaluation type: within_subject
BCI Application
Applications: motor_rehabilitation, prosthetic_control
Environment: laboratory
Online feedback: False
Tags
Pathology: healthy
Modality: motor
Type: imagery
Documentation
DOI: 10.1038/s41597-020-0535-2
License: CC-BY-4.0
Investigators: Xuelin Ma, Shuang Qiu, Changde Du, Junfeng Xing, Huiguang He
Senior author: Huiguang He
Institution: Chinese Academy of Sciences
Department: Institute of Automation
Country: CN
Repository: Harvard Dataverse
Data URL: https://doi.org/10.7910/DVN/RBN3XG
Publication year: 2020
Funding: National Key Research and Development Plan of China (No. 2017YFB1002502); National Natural Science Foundation of China (No. 61976209); National Natural Science Foundation of China (No. 61906188)
Ethics approval: Ethics Committee of the Institute of Automation, Chinese Academy of Sciences
Keywords: motor imagery, EEG, BCI, same limb, hand, elbow
References
X. Ma, S. Qiu, C. Du, J. Xing, and H. He, “Multi-channel EEG recording during motor imagery of different joints from the same limb,” Scientific Data, vol. 7, no. 1, p. 191, 2020. DOI: 10.1038/s41597-020-0535-2 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Cohort#
Dataset Statistics#
Age distribution by gender (n=25, range 23–29 yr, mean 25.5 yr)
Sex composition
Channel counts (ch)
Sampling frequencies: 1000.0 Hz (n=375 recordings)
Total recording duration: 35 h
Signal · Electrodes & live trace#
Live trace viewer — sub-13 · ses-10 · task-imagery · run-0
Showing one representative recording out of
25 subjects and 375 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 64 sensors — 64 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
Motor imagery dataset from Ma et al. 2020 |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2019 |
Authors |
Xuelin Ma, Shuang Qiu, Changde Du, Junfeng Xing, Huiguang He |
License |
CC-BY-4.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000167,
title = {Motor imagery dataset from Ma et al. 2020},
author = {Xuelin Ma and Shuang Qiu and Changde Du and Junfeng Xing and Huiguang He},
doi = {10.82901/nemar.nm000167},
url = {https://doi.org/10.82901/nemar.nm000167},
}
API Reference#
eegdash.datasetEEGDashDatasetNM000167 · Ma2020eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.NM000167(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Motor imagery dataset from Ma et al. 2020
- Study:
nm000167(NeMAR)- Author (year):
Ma2020- Canonical:
—
Also importable as:
NM000167,Ma2020.Modality:
eeg; Experiment type:Motor; Subject type:Healthy. Subjects: 25; recordings: 375; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000167 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000167 DOI: https://doi.org/10.82901/nemar.nm000167
Examples
>>> from eegdash.dataset import NM000167 >>> dataset = NM000167(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000167 to reproduce the tutorial on this dataset.
Citation
Xuelin Ma, Shuang Qiu, Changde Du, Junfeng Xing, Huiguang He (2019). Motor imagery dataset from Ma et al. 2020. 10.82901/nemar.nm000167
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.82901/nemar.nm000167.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset