NM000152: eeg dataset, 12 subjects#
Upper-limb elbow-centered motor imagery dataset (10 classes)
Citation: Xin Zhang, Xinyi Yong, Carlo Menon (2019). Upper-limb elbow-centered motor imagery dataset (10 classes). 10.82901/nemar.nm000152
12-participant EEG dataset — Upper-limb elbow-centered motor imagery dataset (10 classes).
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000152
dataset = NM000152(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000152(cache_dir="./data", subject="01")
Advanced query
dataset = NM000152(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000152,
title = {Upper-limb elbow-centered motor imagery dataset (10 classes)},
author = {Xin Zhang and Xinyi Yong and Carlo Menon},
doi = {10.82901/nemar.nm000152},
url = {https://doi.org/10.82901/nemar.nm000152},
}
About This Dataset#
Upper-limb elbow-centered motor imagery dataset (10 classes).
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser
Upper-limb elbow-centered motor imagery dataset (10 classes)
rest
View full README
Upper-limb elbow-centered motor imagery dataset (10 classes)
rest
├─ Sensory-event
├─ Experimental-stimulus
├─ Visual-presentation
└─ Rest
elbow_flexion
├─ Sensory-event
└─ Label/elbow_flexion
drawer
├─ Sensory-event
└─ Label/drawer
soup
├─ Sensory-event
└─ Label/soup
weight_lifting
├─ Sensory-event
└─ Label/weight_lifting
door
├─ Sensory-event
└─ Label/door
plate_cleaning
├─ Sensory-event
└─ Label/plate_cleaning
combing
├─ Sensory-event
└─ Label/combing
pizza_cutting
├─ Sensory-event
└─ Label/pizza_cutting
pick_and_place
├─ Sensory-event
└─ Label/pick_and_place
Paradigm-Specific Parameters
Detected paradigm: motor_imagery
Imagery tasks: elbow_flexion, drawer, soup, weight_lifting, door, plate_cleaning, combing, pizza_cutting, pick_and_place
Cue duration: 5.0 s
Imagery duration: 5.0 s
Data Structure
Trials: 330
Trials context: 15 runs of 24 trials each (4 rest + 4 elbow + 2 each of 8 goal tasks). Total: 60 rest + 30 per MI task = 330.
Preprocessing
Data state: raw
Preprocessing applied: False
Signal Processing
Classifiers: LDA, DAL
Feature extraction: bandpower, CSP, FBCSP
Frequency bands: bandpass=[6.0, 35.0] Hz; mu=[7.0, 13.0] Hz; beta=[13.0, 30.0] Hz
Spatial filters: CSP, FBCSP
Cross-Validation
Method: 5x5-fold
Folds: 5
Evaluation type: within_subject
BCI Application
Applications: motor_control, rehabilitation
Environment: laboratory
Online feedback: False
Tags
Pathology: Healthy
Modality: Motor
Type: Research
Documentation
DOI: 10.1371/journal.pone.0188293
License: CC BY 4.0
Investigators: Xin Zhang, Xinyi Yong, Carlo Menon
Senior author: Carlo Menon
Institution: Simon Fraser University
Department: School of Engineering Science
Country: CA
Repository: Figshare
Publication year: 2017
Keywords: motor imagery, upper limb, elbow, BCI, EEG, kinesthetic imagery
References
X. Zhang, X. Yong, and C. Menon, “Evaluating the versatility of EEG models generated from motor imagery tasks: An exploratory investigation on upper-limb elbow-centered motor imagery tasks,” PLoS ONE, vol. 12, no. 11, e0188293, 2017. DOI: 10.1371/journal.pone.0188293 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Cohort#
Dataset Statistics#
Age distribution by gender (n=12, range 20–33 yr, mean 26.4 yr)
Sex composition
Channel counts: 17 ch (n=180 recordings)
Sampling frequencies: 1000.0 Hz (n=180 recordings)
Total recording duration: 9 h 14 min
Signal · Electrodes & live trace#
Live trace viewer — sub-12 · ses-0 · task-imagery · run-2
Showing one representative recording out of
12 subjects and 180 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 17 sensors — 17 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
Upper-limb elbow-centered motor imagery dataset (10 classes) |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2019 |
Authors |
Xin Zhang, Xinyi Yong, Carlo Menon |
License |
CC BY 4.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000152,
title = {Upper-limb elbow-centered motor imagery dataset (10 classes)},
author = {Xin Zhang and Xinyi Yong and Carlo Menon},
doi = {10.82901/nemar.nm000152},
url = {https://doi.org/10.82901/nemar.nm000152},
}
API Reference#
eegdash.datasetEEGDashDatasetNM000152 · Zhang2017eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.NM000152(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Upper-limb elbow-centered motor imagery dataset (10 classes)
- Study:
nm000152(NeMAR)- Author (year):
Zhang2017- Canonical:
—
Also importable as:
NM000152,Zhang2017.Modality:
eeg; Experiment type:Motor; Subject type:Healthy. Subjects: 12; recordings: 180; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000152 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000152 DOI: https://doi.org/10.82901/nemar.nm000152
Examples
>>> from eegdash.dataset import NM000152 >>> dataset = NM000152(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000152 to reproduce the tutorial on this dataset.
Citation
Xin Zhang, Xinyi Yong, Carlo Menon (2019). Upper-limb elbow-centered motor imagery dataset (10 classes). 10.82901/nemar.nm000152
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.82901/nemar.nm000152.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset