NM000216: eeg dataset, 43 subjects#
P300 dataset BI2015a from a “Brain Invaders” experiment
Citation: Louis Korczowski, Martine Cederhout, Anton Andreev, Grégoire Cattan, Pedro Luiz Coelho Rodrigues, Violette Gautheret, Marco Congedo (2019). P300 dataset BI2015a from a “Brain Invaders” experiment.
43-participant EEG dataset — P300 dataset BI2015a from a "Brain Invaders" experiment.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000216
dataset = NM000216(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000216(cache_dir="./data", subject="01")
Advanced query
dataset = NM000216(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000216,
title = {P300 dataset BI2015a from a "Brain Invaders" experiment},
author = {Louis Korczowski and Martine Cederhout and Anton Andreev and Grégoire Cattan and Pedro Luiz Coelho Rodrigues and Violette Gautheret and Marco Congedo},
}
About This Dataset#
P300 dataset BI2015a from a “Brain Invaders” experiment.
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser
P300 dataset BI2015a from a “Brain Invaders” experiment
Target
├─ Sensory-event
├─ Experimental-stimulus
View full README
P300 dataset BI2015a from a “Brain Invaders” experiment
Target
├─ Sensory-event
├─ Experimental-stimulus
├─ Visual-presentation
└─ Target
NonTarget
├─ Sensory-event
├─ Experimental-stimulus
├─ Visual-presentation
└─ Non-target
Paradigm-Specific Parameters
Detected paradigm: p300
Number of targets: 1
Number of repetitions: 12
Data Structure
Trials: variable per subject (up to 8 attempts per level, 9 levels per session, 3 sessions)
Blocks per session: 3
Trials context: 9 levels per session with variable duration (average ~5 minutes per session, max 10 minutes)
Preprocessing
Data state: raw EEG with synchronized USB tagging (reduced jitter using USB digital-to-analog converter)
Preprocessing applied: False
Notes: no digital filter applied during acquisition; tags synchronized with EEG signals to reduce jitter; consistent tagging latency across Brain Invaders databases
Signal Processing
Classifiers: Riemannian Minimum Distance to Mean (RMDM), adaptive
Feature extraction: Covariance/Riemannian
Cross-Validation
Evaluation type: cross_session
BCI Application
Applications: gaming
Environment: small room (4 square meters) with 24 inch screen
Online feedback: True
Tags
Pathology: Healthy
Modality: Visual
Type: Perception
Documentation
DOI: 10.5281/zenodo.3266930
Associated paper DOI: hal-02172347
License: CC-BY-4.0
Investigators: Louis Korczowski, Martine Cederhout, Anton Andreev, Grégoire Cattan, Pedro Luiz Coelho Rodrigues, Violette Gautheret, Marco Congedo
Senior author: Marco Congedo
Institution: GIPSA-lab, CNRS, University Grenoble-Alpes, Grenoble INP
Address: GIPSA-lab, 11 rue des Mathématiques, Grenoble Campus BP46, F-38402, France
Country: FR
Repository: Zenodo
Data URL: https://doi.org/10.5281/zenodo.3266930
Publication year: 2019
Ethics approval: Ethical Committee of the University of Grenoble Alpes (Comité d’Ethique pour la Recherche Non-Interventionnelle)
How to acknowledge: Korczowski, L., Cederhout, M., Andreev, A., Cattan, G., Rodrigues, P.L.C., Gautheret, V., Congedo, M. (2019). Brain Invaders calibration-less P300-based BCI with modulation of flash duration Dataset (bi2015a). Technical Report, GIPSA-lab.
Keywords: Electroencephalography (EEG), P300, Brain-Computer Interface, Experiment
Abstract
This dataset contains electroencephalographic (EEG) recordings of 50 subjects playing to a visual P300 Brain-Computer Interface (BCI) videogame named Brain Invaders. The interface uses the oddball paradigm on a grid of 36 symbols (1 Target, 35 Non-Target) that are flashed pseudo-randomly to elicit the P300 response. EEG data were recorded using 32 active wet electrodes with three conditions: flash duration 50ms, 80ms or 110ms. The experiment took place at GIPSA-lab, Grenoble, France, in 2015.
Methodology
The experiment was designed to study the influence of the flash duration on a calibration-less P300-based BCI system with wet electrodes and as a screening session for potential candidates for a broader multi-user BCI study. The visual P300 is an event-related potential (ERP) elicited by an expected but unpredictable target visual stimulation (oddball paradigm), with peaking amplitude 240-600 ms after stimulus onset. During the experiment, the output of a real-time adaptive Riemannian Minimum Distance to Mean (RMDM) classifier was used for assessing the participants’ command. This scheme allows a calibration-free classifier. Before and after the three game sessions, around one minute of resting state and eyes closed conditions were recorded. The interface of Brain Invaders is composed of 36 aliens. In the Brain Invaders P300 paradigm, a repetition is composed of 12 flashes of pseudo-random groups of six symbols chosen in such a way that after each repetition each symbol has flashed exactly two times. A game session was compounded by nine levels, consisting in a unique and predefined configuration of the 36 symbols of the interface. Aliens slowly and regularly moved according to a predefined path keeping constant the inter-distance between adjacent aliens to maintain high player’s attention during the whole experiment.
References
Korczowski, L., Cederhout, M., Andreev, A., Cattan, G., Rodrigues, P. L. C., Gautheret, V., & Congedo, M. (2019). Brain Invaders calibration-less P300-based BCI with modulation of flash duration Dataset (BI2015a) https://hal.archives-ouvertes.fr/hal-02172347 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Cohort#
Dataset Statistics#
Age distribution by gender (n=43, range 24–24 yr, mean 23.0 yr)
Channel counts: 32 ch (n=129 recordings)
Sampling frequencies: 512.0 Hz (n=129 recordings)
Total recording duration: 11 h 39 min
Signal · Electrodes & live trace#
Live trace viewer — sub-13 · ses-2 · task-p300 · run-0
Showing one representative recording out of
43 subjects and 129 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 32 sensors — 32 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
P300 dataset BI2015a from a “Brain Invaders” experiment |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2019 |
Authors |
Louis Korczowski, Martine Cederhout, Anton Andreev, Grégoire Cattan, Pedro Luiz Coelho Rodrigues, Violette Gautheret, Marco Congedo |
License |
CC-BY-4.0 |
Citation / DOI |
Unknown |
Source links |
OpenNeuro | NeMAR | Source URL |
API Reference#
eegdash.datasetEEGDashDatasetNM000216 · Korczowski2015_P300eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.NM000216(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
P300 dataset BI2015a from a “Brain Invaders” experiment
- Study:
nm000216(NeMAR)- Author (year):
Korczowski2015_P300- Canonical:
—
Also importable as:
NM000216,Korczowski2015_P300.Modality:
eeg; Experiment type:Perception; Subject type:Healthy. Subjects: 43; recordings: 129; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000216 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000216
Examples
>>> from eegdash.dataset import NM000216 >>> dataset = NM000216(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000216 to reproduce the tutorial on this dataset.
Citation
Louis Korczowski, Martine Cederhout, Anton Andreev, Grégoire Cattan, Pedro Luiz Coelho Rodrigues, … (2019). P300 dataset BI2015a from a "Brain Invaders" experiment.
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset