EEGdashNeMARNM000221
Iss. 221 · 19 subjects · 19 recordings · CC-BY-4.0
Dataset Brief · Alphawaves dataset

NM000221: eeg dataset, 19 subjects#

Alphawaves dataset

Citation: Grégoire Cattan, Pedro Luiz Coelho Rodrigues, Marco Congedo (2018). Alphawaves dataset.

19-participant EEG dataset — Alphawaves dataset.

EEG · 16 ch512 HzBIDS 1.9.0Task · rstateHealthyResting StateResting-state
Layer 01Study
What was asked
Hypothesis, independent & dependent variables, paradigm, cohort, and the editorial caveats around what the recordings can and cannot answer.
Layer 02Signal · BIDS
What was recorded
Sidecars, channels & electrodes, coordinate system, event semantics, and quality stats from the NEMAR pipeline when available.
Layer 03Training · ML
What you can train on
Recommended access modes — MNE Raw, braindecode windows, PyTorch DataLoader — plus the targets the metadata makes addressable.
§ 01Access · Get started

Quickstart#

Install

pip install eegdash

Access the data

from eegdash.dataset import NM000221

dataset = NM000221(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)

Filter by subject

dataset = NM000221(cache_dir="./data", subject="01")

Advanced query

dataset = NM000221(
    cache_dir="./data",
    query={"subject": {"$in": ["01", "02"]}},
)

Iterate recordings

for rec in dataset:
    print(rec.subject, rec.raw.info['sfreq'])

If you use this dataset in your research, please cite the original authors.

BibTeX

@dataset{nm000221,
  title = {Alphawaves dataset},
  author = {Grégoire Cattan and Pedro Luiz Coelho Rodrigues and Marco Congedo},
}
§ 02Study · The README

About This Dataset#

Alphawaves dataset

Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser

Alphawaves dataset

closed
├─ Experiment-structure
└─ Rest
View full README

Alphawaves dataset

closed
     ├─ Experiment-structure
     └─ Rest
        └─ Close, Eye

open
├─ Experiment-structure
└─ Rest
   └─ Open, Eye

Paradigm-Specific Parameters

  • Detected paradigm: resting_state

Data Structure

  • Trials: 10

Preprocessing

  • Data state: raw

  • Preprocessing applied: False

Signal Processing

  • Feature extraction: ERS

  • Frequency bands: alpha=[8, 12] Hz

Tags

  • Pathology: Healthy

  • Modality: Resting State

  • Type: Resting-state

Documentation

  • DOI: 10.5281/zenodo.2348891

  • Associated paper DOI: hal-02086581

  • License: CC-BY-4.0

  • Investigators: Grégoire Cattan, Pedro Luiz Coelho Rodrigues, Marco Congedo

  • Senior author: Marco Congedo

  • Contact: pedro-luiz.coelho-rodrigues@grenoble-inp.fr

  • Institution: GIPSA-lab, CNRS, University Grenoble-Alpes, Grenoble INP

  • Department: GIPSA-lab

  • Address: 11 rue des Mathématiques, Grenoble Campus BP46, F-38402, France

  • Country: FR

  • Repository: Zenodo

  • Data URL: https://doi.org/10.5281/zenodo.2348891

  • Publication year: 2018

  • Ethics approval: All participants provided written informed consent

  • How to acknowledge: Please cite: Cattan, Rodrigues & Congedo (2018). EEG Alpha Waves Dataset. GIPSA-lab Research Report. https://hal.science/hal-02086581

References

G. Cattan, P. L. Coelho Rodrigues, and M. Congedo, ‘EEG Alpha Waves Dataset’, 2018. Available: https://hal.archives-ouvertes.fr/hal-02086581 Rodrigues PLC. Alpha-Waves-Dataset [Internet]. Grenoble: GIPSA-lab; 2018. Available from: plcrodrigues/Alpha-Waves-Dataset Notes .. versionadded:: 1.1.0 Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks) NeuroTechX/moabb

§ 03Cohort · Participants

Cohort#

Dataset Statistics#

Age distribution by gender (n=19, range 26–26 yr, mean 25.0 yr)

25
Other · 19

Channel counts: 16 ch (n=19 recordings)

Sampling frequencies: 512.0 Hz (n=19 recordings)

Total recording duration: 57 min

§ 04Signal · Electrodes & trace

Signal · Electrodes & live trace#

Fig. 01 Signal & montage 16 ch · EEG · 512 Hz · 19 subjects, 19 recordings
Live trace viewer — sub-13 · ses-0 · task-rstate · run-0

Showing one representative recording out of 19 subjects and 19 recordings in this dataset. Browse the full set on OpenNeuro; drop any other _eeg.{set,edf,bdf,vhdr} file onto the viewer (or pass ?eeg=<url>) to inspect it.

Electrode layout — EEG · 16 sensors — 16 channels

NEMAR Processing Statistics#

The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.

HED event descriptors word cloud HED event descriptors word cloud — NM000221
§ 05Manifest · BIDS tree

Manifest#

File Explorer#

Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.

Recordings
Files
Subjects
Modalities
Click to load file structure…
Full dataset metadata table

Dataset ID

NM000221

Title

Alphawaves dataset

Author (year)

Cattan2017

Canonical

Importable as

NM000221, Cattan2017

Year

2018

Authors

Grégoire Cattan, Pedro Luiz Coelho Rodrigues, Marco Congedo

License

CC-BY-4.0

Citation / DOI

Unknown

Source links

OpenNeuro | NeMAR | Source URL

§ 06API · Programmatic access

API Reference#

Signature
eegdash.dataset
class
eegdash.dataset.NM000221(cache_dir, query=None, s3_bucket=None, **kwargs)
Bases: EEGDashDataset
Author (year)Cattan2017
Canonical
Importable asNM000221 · Cattan2017
Sourceeegdash/dataset/registry.py · [source ↗]
class eegdash.dataset.NM000221(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#

Alphawaves dataset

Study:

nm000221 (NeMAR)

Author (year):

Cattan2017

Canonical:

Also importable as: NM000221, Cattan2017.

Modality: eeg; Experiment type: Resting-state; Subject type: Healthy. Subjects: 19; recordings: 19; tasks: 1.

Parameters:
  • cache_dir (str | Path) – Directory where data are cached locally.

  • query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key dataset.

  • s3_bucket (str | None) – Base S3 bucket used to locate the data.

  • **kwargs (dict) – Additional keyword arguments forwarded to EEGDashDataset.

data_dir#

Local dataset cache directory (cache_dir / dataset_id).

Type:

Path

query#

Merged query with the dataset filter applied.

Type:

dict

records#

Metadata records used to build the dataset, if pre-fetched.

Type:

list[dict] | None

Notes

Each item is a recording; recording-level metadata are available via dataset.description. query supports MongoDB-style filters on fields in ALLOWED_QUERY_FIELDS and is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.

References

OpenNeuro dataset: https://openneuro.org/datasets/nm000221 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000221

Examples

>>> from eegdash.dataset import NM000221
>>> dataset = NM000221(cache_dir="./data")
>>> recording = dataset[0]
>>> raw = recording.load()
__init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
save(path: str, overwrite: bool = False, offset: int = 0)[source]#

Save datasets to files by creating one subdirectory for each dataset:

path/
    0/
        0-raw.fif | 0-epo.fif
        description.json
        raw_preproc_kwargs.json (if raws were preprocessed)
        window_kwargs.json (if this is a windowed dataset)
        window_preproc_kwargs.json  (if windows were preprocessed)
        target_name.json (if target_name is not None and dataset is raw)
    1/
        1-raw.fif | 1-epo.fif
        description.json
        raw_preproc_kwargs.json (if raws were preprocessed)
        window_kwargs.json (if this is a windowed dataset)
        window_preproc_kwargs.json  (if windows were preprocessed)
        target_name.json (if target_name is not None and dataset is raw)
Parameters:
  • path (str) –

    Directory in which subdirectories are created to store

    -raw.fif | -epo.fif and .json files to.

  • overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.

  • offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.

Access modesMNE → braindecode → PyTorch → ML
.rawMNE Raw object — standard tools (filter, epoch, ICA, plot_psd).mne
DataLoaderWraps the windowed dataset into a PyTorch DataLoader; supports parallel workers and on-the-fly augmentations.pytorch
Zarr cacheOptional braindecode Zarr mirror for fast resume; persisted to cache_dir.zarr
Hugging FaceNo per-dataset mirror published yet — browse the EEGDash org listing for sibling datasets. See the datasets loader API.huggingface
Croissant 1.0Machine-readable JSON-LD descriptorNM000221.croissant.json (MLCommons schema, ingestible by PyTorch / TensorFlow / JAX).mlcommons
Examples using EEGDashcurated · start here

Swap any load_dataset(...) call for nm000221 to reproduce the tutorial on this dataset.

Citation

Grégoire Cattan, Pedro Luiz Coelho Rodrigues, Marco Congedo (2018). Alphawaves dataset.

Provenance

¹Contributed to nemar in BIDS format.

²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.

BIDS
BIDS 1.9.0
Sidecars
events · events.json · channels · eeg.json
Provenance
CC-BY-4.0 · DOI not on file
Machine-readable
Mirrors

See Also#