NM000188: eeg dataset, 10 subjects#
BNCI 2014-009 P300 dataset
Citation: P Aricò, F Aloise, F Schettini, S Salinari, D Mattia, F Cincotti (2013). BNCI 2014-009 P300 dataset. 10.82901/nemar.nm000188
10-participant EEG dataset — BNCI 2014-009 P300 dataset.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000188
dataset = NM000188(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000188(cache_dir="./data", subject="01")
Advanced query
dataset = NM000188(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000188,
title = {BNCI 2014-009 P300 dataset},
author = {P Aricò and F Aloise and F Schettini and S Salinari and D Mattia and F Cincotti},
doi = {10.82901/nemar.nm000188},
url = {https://doi.org/10.82901/nemar.nm000188},
}
About This Dataset#
BNCI 2014-009 P300 dataset.
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser
BNCI 2014-009 P300 dataset
Target
View full README
BNCI 2014-009 P300 dataset
Target
├─ Sensory-event
├─ Experimental-stimulus
├─ Visual-presentation
└─ Target
NonTarget
├─ Sensory-event
├─ Experimental-stimulus
├─ Visual-presentation
└─ Non-target
Paradigm-Specific Parameters
Detected paradigm: p300
Number of targets: 36
Number of repetitions: 8
Inter-stimulus interval: 125.0 ms
Stimulus onset asynchrony: 250.0 ms
Data Structure
Trials: 18
Blocks per session: 3
Trials context: 6 trials × 3 runs per session
Preprocessing
Data state: preprocessed
Preprocessing applied: True
Steps: bandpass filtering
Highpass filter: 0.1 Hz
Lowpass filter: 20.0 Hz
Bandpass filter: {‘low_cutoff_hz’: 0.1, ‘high_cutoff_hz’: 20.0}
Filter type: Butterworth
Filter order: 8
Re-reference: linked earlobes
Epoch window: [0.0, 0.8]
Notes: EEG acquired using g.USBamp amplifier (g.Tec, Austria), digitized at 256 Hz
Signal Processing
Classifiers: LDA, SWLDA
Feature extraction: Wavelet, Time-Frequency, CWT
Frequency bands: analyzed=[1.0, 20.0] Hz
Cross-Validation
Method: cross-validation
Folds: 3
Evaluation type: within_session
Performance (Original Study)
P300 Latency Jitter Correlation: negative correlation with accuracy
BCI Application
Applications: communication, spelling
Environment: laboratory
Online feedback: False
Tags
Pathology: Healthy
Modality: Visual
Type: P300, ERP
Documentation
Description: Complete record of P300 evoked potentials recorded with BCI2000 using two different paradigms: P300 Speller (overt attention) and GeoSpell (covert attention). 10 healthy subjects focused on one out of 36 different characters.
DOI: 10.1088/1741-2560/11/3/035008
Associated paper DOI: 10.3389/fnhum.2013.00732
License: CC-BY-NC-ND-4.0
Investigators: P Aricò, F Aloise, F Schettini, S Salinari, D Mattia, F Cincotti
Senior author: F Cincotti
Contact: p.arico@hsantalucia.it
Institution: Fondazione Santa Lucia IRCCS
Department: Neuroelectrical Imaging and BCI Lab
Address: Rome, Italy
Country: Italy
Repository: BNCI Horizon
Publication year: 2014
Ethics approval: Approved by local Ethics Committee
Keywords: P300 latency jitter, brain-computer interface, covert attention, wavelet analysis, single epoch
Abstract
This dataset represents a complete record of P300 evoked potentials recorded with BCI2000 using two different paradigms: a paradigm based on the P300 Speller originally described by Farwell and Donchin in overt attention condition and a paradigm based on the GeoSpell interface used in covert attention condition. In these sessions, 10 healthy subjects focused on one out of 36 different characters. The objective was to predict the correct character in each of the provided character selection epochs.
Methodology
Ten healthy subjects (10 female, mean age = 26.8 ± 5.6) with previous experience with P300-based BCIs attended 4 recording sessions. Scalp EEG potentials were measured using 16 Ag/AgCl electrodes arranged on an elastic cap per the 10-10 standard. Each electrode was referenced to the linked earlobes and grounded to the right mastoid. The EEG was acquired using a g.USBamp amplifier (g.Tec, Austria), digitized at 256 Hz, high pass- and low pass-filtered with cutoff frequencies of 0.1 Hz and 20 Hz, respectively. The electrode impedance did not exceed 10 kΩ. Visual stimulation, acquisition and online classification were performed with BCI2000. Each subject attended 4 recording sessions. During each session, the subject performed three runs with each of the stimulation interfaces. Each trial consisted of eight stimulation sequences, and thus, 16 intensifications of the target character. Each stimulus was intensified for 125 ms, with an inter stimulus interval (ISI) of 125 ms, yielding a 250 ms lag between the appearance of two stimuli (SOA). Pseudorandom stimulation sequences were assembled so that each target intensification would not occur within 500 ms after the previous one to avoid the attentional blink phenomenon.
References
Riccio, A., Simione, L., Schettini, F., Pizzimenti, A., Inghilleri, M., Belardinelli, M. O., & Mattia, D. (2013). Attention and P300-based BCI performance in people with amyotrophic lateral sclerosis. Frontiers in human neuroscience, 7, 732. https://doi.org/10.3389/fnhum.2013.00732
Notes
.. note::
BNCI2014_009 was previously named BNCI2014009. BNCI2014009 will be removed in version 1.1.
.. versionadded:: 0.4.0
Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896
Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8
Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks)
NeuroTechX/moabb
Cohort#
Dataset Statistics#
Age distribution by gender (n=10, range 22–40 yr, mean 26.8 yr)
Sex composition
Channel counts: 16 ch (n=30 recordings)
Sampling frequencies: 256.0 Hz (n=30 recordings)
Total recording duration: 1 h 38 min
Signal · Electrodes & live trace#
Live trace viewer — sub-6 · ses-2 · task-p300 · run-0
Showing one representative recording out of
10 subjects and 30 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 16 sensors — 16 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
BNCI 2014-009 P300 dataset |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2013 |
Authors |
P Aricò, F Aloise, F Schettini, S Salinari, D Mattia, F Cincotti |
License |
CC-BY-NC-ND-4.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000188,
title = {BNCI 2014-009 P300 dataset},
author = {P Aricò and F Aloise and F Schettini and S Salinari and D Mattia and F Cincotti},
doi = {10.82901/nemar.nm000188},
url = {https://doi.org/10.82901/nemar.nm000188},
}
API Reference#
eegdash.datasetEEGDashDatasetNM000188 · Arico2014eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.NM000188(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
BNCI 2014-009 P300 dataset
- Study:
nm000188(NeMAR)- Author (year):
Arico2014- Canonical:
—
Also importable as:
NM000188,Arico2014.Modality:
eeg; Experiment type:Attention; Subject type:Healthy. Subjects: 10; recordings: 30; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000188 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000188 DOI: https://doi.org/10.82901/nemar.nm000188
Examples
>>> from eegdash.dataset import NM000188 >>> dataset = NM000188(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000188 to reproduce the tutorial on this dataset.
Citation
P Aricò, F Aloise, F Schettini, S Salinari, D Mattia, … (2013). BNCI 2014-009 P300 dataset. 10.82901/nemar.nm000188
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.82901/nemar.nm000188.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset