NM000341: eeg dataset, 12 subjects#
Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD)
Citation: G. Cattan, P. L. C. Rodrigues, M. Congedo (2019). Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD). 10.5281/zenodo.2617084
12-participant EEG dataset — Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD).
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000341
dataset = NM000341(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000341(cache_dir="./data", subject="01")
Advanced query
dataset = NM000341(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000341,
title = {Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD)},
author = {G. Cattan and P. L. C. Rodrigues and M. Congedo},
doi = {10.5281/zenodo.2617084},
url = {https://doi.org/10.5281/zenodo.2617084},
}
About This Dataset#
Passive Head Mounted Display with Music Listening dataset [1]_.
Code: Cattan2019-PHMD
Paradigm: rstate DOI: 10.5281/zenodo.2617084 Subjects: 12 Sessions per subject: 1 Events: off=1, on=2 Trial interval: [0, 1] s File format: mat and csv
Cattan2019-PHMD
Acquisition
Sampling rate: 512.0 Hz Number of channels: 16 Channel types: eeg=16 Channel names: Cz, Fc5, Fc6, Fp1, Fp2, Fz, O1, O2, Oz, P3, P4, P7, P8, Pz, T7, T8 Montage: standard_1020 Hardware: g.USBamp
View full README
Cattan2019-PHMD
Acquisition
Sampling rate: 512.0 Hz Number of channels: 16 Channel types: eeg=16 Channel names: Cz, Fc5, Fc6, Fp1, Fp2, Fz, O1, O2, Oz, P3, P4, P7, P8, Pz, T7, T8 Montage: standard_1020 Hardware: g.USBamp Software: OpenViBE Reference: right earlobe Ground: AFz Sensor type: wet Line frequency: 50.0 Hz Online filters: no digital filter Cap manufacturer: EasyCap Cap model: EC20 Electrode type: wet
Participants
Number of subjects: 12 Health status: healthy Age: mean=26.25, std=2.63 Gender distribution: male=9, female=3 Species: human
Experimental Protocol
Paradigm: rstate Number of classes: 2 Class labels: off, on Trial duration: 60.0 s Study design: focus on the marker and to listen to the music that was diffused during the experiment (Bach Invention from one to ten on harpsichord). Feedback type: none Stimulus type: visual fixation marker Stimulus modalities: visual, auditory Primary modality: auditory Training/test split: False Instructions: Subjects were asked to focus on the marker and to listen to the music that was diffused during the experiment
HED Event Annotations
Schema: HED 8.4.0 | Browse: https://www.hedtags.org/hed-schema-browser off
├─ Experiment-structure └─ Rest on├─ Experiment-structure └─ RestData Structure
Blocks per session: 10 Block duration: 60.0 s Trials context: 5 blocks with smartphone switched-off and 5 blocks with smartphone switched-on, randomized sequence
Preprocessing
Data state: raw, unfiltered Preprocessing applied: False Notes: Data were acquired with no digital filter. No Faraday cage used to mimic real-world usage.
BCI Application
Applications: vr_ar Environment: laboratory Online feedback: False
Tags
Pathology: Healthy Modality: EEG Type: Resting State
Documentation
Description: This dataset contains electroencephalographic recordings of 12 subjects listening to music with and without a passive head-mounted display DOI: 10.5281/zenodo.2617084 Associated paper DOI: 10.2312/vriphys.20181064 License: CC-BY-4.0 Investigators: G. Cattan, P. L. C. Rodrigues, M. Congedo Senior author: M. Congedo Institution: GIPSA-lab, CNRS, University Grenoble-Alpes, Grenoble INP Address: GIPSA-lab, 11 rue des Mathématiques, Grenoble Campus BP46, F-38402, France Country: FR Repository: Zenodo Data URL: https://doi.org/10.5281/zenodo.2617084 Publication year: 2019 How to acknowledge: Python code for manipulating the data is available at plcrodrigues/py.PHMDML.EEG.2017-GIPSA Keywords: Electroencephalography (EEG), Virtual Reality (VR), Passive Head-Mounted Display (PHMD), experiment
Abstract
We describe the experimental procedures for a dataset that we have made publicly available at https://doi.org/10.5281/zenodo.2617084 in mat (Mathworks, Natick, USA) and csv formats. This dataset contains electroencephalographic recordings of 12 subjects listening to music with and without a passive head-mounted display, that is, a head-mounted display which does not include any electronics at the exception of a smartphone. The electroencephalographic headset consisted of 16 electrodes. Data were recorded during a pilot experiment taking place in the GIPSA-lab, Grenoble, France, in 2017. Python code for manipulating the data is available at plcrodrigues/py.PHMDML.EEG.2017-GIPSA. The ID of this dataset is PHMDML.EEG.2017-GIPSA.
Methodology
Subjects sat in front of screen at ~50 cm distance without instrumental noise-reduction devices. EEG cap and Samsung Gear were placed on subject. Smartphones were continuously swapped between switched-on and switched-off conditions. Each block consisted of 1 minute of EEG recording with eyes opened. The sequence of 10 blocks was randomized prior to experiment using random number generator with no autocorrelation. Triggers marked beginning of each block (1=switched-off, 2=switched-on).
References
Cattan, P. L. Coelho Rodrigues, and M. Congedo, ‘Passive Head-Mounted Display Music-Listening EEG dataset’, Gipsa-Lab ; IHMTEK, Research Report 2, Mar. 2019. doi: 10.5281/zenodo.2617084.
Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C., Chaumon, M., Mikulan, E., Tavabi, K., Hochenberger, R., Welke, D., Brunner, C., Rockhill, A., Larson, E., Gramfort, A. and Jas, M. (2019). MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. Journal of Open Source Software 4: (1896). https://doi.org/10.21105/joss.01896 Pernet, C. R., Appelhoff, S., Gorgolewski, K. J., Flandin, G., Phillips, C., Delorme, A., Oostenveld, R. (2019). EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. Scientific Data, 6, 103. https://doi.org/10.1038/s41597-019-0104-8 Generated by MOABB 1.5.0 (Mother of All BCI Benchmarks) NeuroTechX/moabb
Cohort#
Dataset Statistics#
Age distribution by gender (n=12, range 26–26 yr, mean 26.0 yr)
Channel counts: 16 ch (n=12 recordings)
Sampling frequencies: 512.0 Hz (n=12 recordings)
Total recording duration: 2 h 44 min
Signal · Electrodes & live trace#
Live trace viewer — sub-1 · ses-0 · task-rstate · run-0
Showing one representative recording out of
12 subjects and 12 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 16 sensors — 16 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD) |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2019 |
Authors |
|
License |
CC-BY-4.0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000341,
title = {Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD)},
author = {G. Cattan and P. L. C. Rodrigues and M. Congedo},
doi = {10.5281/zenodo.2617084},
url = {https://doi.org/10.5281/zenodo.2617084},
}
API Reference#
eegdash.datasetEEGDashDatasetNM000341 · Cattan2019_PHMDeegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.NM000341(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD)
- Study:
nm000341(NeMAR)- Author (year):
Cattan2019_PHMD- Canonical:
—
Also importable as:
NM000341,Cattan2019_PHMD.Modality:
eeg; Experiment type:Resting-state; Subject type:Healthy. Subjects: 12; recordings: 12; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000341 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000341 DOI: https://doi.org/10.5281/zenodo.2617084
Examples
>>> from eegdash.dataset import NM000341 >>> dataset = NM000341(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000341 to reproduce the tutorial on this dataset.
Citation
G. Cattan, P. L. C. Rodrigues, M. Congedo (2019). Cattan, Rodrigues & Congedo 2019 — Passive Head-Mounted Display Music-Listening EEG dataset (PHMD). 10.5281/zenodo.2617084
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.5281/zenodo.2617084.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset