NM000154: eeg dataset, 24 subjects#
EEG meditation study
Citation: Arnaud Delorme, Tracy Brandmeyer (20). EEG meditation study. 10.82901/nemar.nm000154
24-participant EEG dataset — EEG meditation study.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import NM000154
dataset = NM000154(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = NM000154(cache_dir="./data", subject="01")
Advanced query
dataset = NM000154(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{nm000154,
title = {EEG meditation study},
author = {Arnaud Delorme and Tracy Brandmeyer},
doi = {10.82901/nemar.nm000154},
url = {https://doi.org/10.82901/nemar.nm000154},
}
About This Dataset#
This meditation experiment contains 24 subjects. Subjects were
meditating and were interupted about every 2 minutes to indicate their level of concentration and mind wandering. The scientific article (see Reference) contains all methodological details.
Note that although the original files were recorded at 2048 Hz, they were downsampled to 256 Hz using the BDF decimator provided by BIOSEMI (https://www.biosemi.com/download.htm).
Arnaud Delorme (October 17, 2018; updated June 2024)
Cohort#
Dataset Statistics#
Age distribution by gender (n=23, range 29–78 yr, mean 43.4 yr)
Sex composition
Channel counts: 74 ch (n=40 recordings)
Sampling frequencies: 256.0 Hz (n=40 recordings)
Total recording duration: 27 h
Signal · Electrodes & live trace#
Live trace viewer — sub-021 · ses-01 · task-meditation
Showing one representative recording out of
24 subjects and 40 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 64 sensors — 64 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
EEG meditation study |
Author (year) |
— |
Canonical |
— |
Importable as |
|
Year |
20 |
Authors |
Arnaud Delorme, Tracy Brandmeyer |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{nm000154,
title = {EEG meditation study},
author = {Arnaud Delorme and Tracy Brandmeyer},
doi = {10.82901/nemar.nm000154},
url = {https://doi.org/10.82901/nemar.nm000154},
}
API Reference#
eegdash.datasetEEGDashDataset- class eegdash.dataset.NM000154(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
EEG meditation study
- Study:
nm000154(NeMAR)- Author (year):
nan- Canonical:
—
Also importable as:
NM000154,nan.Modality:
eeg. Subjects: 24; recordings: 40; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/nm000154 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=nm000154 DOI: https://doi.org/10.82901/nemar.nm000154
Examples
>>> from eegdash.dataset import NM000154 >>> dataset = NM000154(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchSwap any load_dataset(...) call for nm000154 to reproduce the tutorial on this dataset.
Citation
Arnaud Delorme, Tracy Brandmeyer (20). EEG meditation study. 10.82901/nemar.nm000154
Provenance
¹Contributed to nemar in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.82901/nemar.nm000154.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset