DS006065: ieeg dataset, 7 subjects#
TSS_iEEG
Access recordings and metadata through EEGDash.
Citation: James Kragel, Joel Voss (2025). TSS_iEEG. 10.18112/openneuro.ds006065.v1.0.0
Modality: ieeg Subjects: 7 Recordings: 45 License: CC0 Source: openneuro
Metadata: Complete (100%)
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import DS006065
dataset = DS006065(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = DS006065(cache_dir="./data", subject="01")
Advanced query
dataset = DS006065(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{ds006065,
title = {TSS_iEEG},
author = {James Kragel and Joel Voss},
doi = {10.18112/openneuro.ds006065.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds006065.v1.0.0},
}
About This Dataset#
iEEG Dataset: Theta-synchronized Stimulation of Human Hippocampal Networks
Information
This folder contains intracranial EEG (iEEG) data from 7 participants undergoing closed-loop stimulation as part of a study on hippocampal network connectivity, as used in the following publication: Kragel et al., 2025, Nature Communications: “Closed-loop control of theta oscillations enhances human hippocampal network connectivity” For questions or further information, contact:
View full README
iEEG Dataset: Theta-synchronized Stimulation of Human Hippocampal Networks
Information
This folder contains intracranial EEG (iEEG) data from 7 participants undergoing closed-loop stimulation as part of a study on hippocampal network connectivity, as used in the following publication: Kragel et al., 2025, Nature Communications: “Closed-loop control of theta oscillations enhances human hippocampal network connectivity” For questions or further information, contact: - James Kragel: jkragel@uchicago.edu
- Joel Voss: joelvoss@uchicago.edu
License
This dataset is made available under the **Public Domain Dedication and License v1.0**. Full text: http://www.opendatacommons.org/licenses/pddl/1.0
Dataset and Protocol
The data are organized according to the Brain Imaging Data Structure (BIDS) iEEG specification, a community-driven standard for organizing neurophysiology data along with its metadata.
Structure
Each subject folder contains the raw iEEG data for that subject, segmented into different periods of the stimulation protocol: - Pre-stimulation evoked potentials - Post-stimulation evoked potentials - Pre-stimulation rest - Post-stimulation rest - Closed-loop stimulation
- Control stimulation
Raw Data
The raw data are stored in BrainVision format (vhdr, vmrk, and eeg files). You can read these files into memory using the following tools:
- MATLAB: FieldTrip toolbox
- Python: pybv package <https://github.com/bids-standard/pybv>\`__
Electrode Coordinates
Electrode coordinates are provided in **MNI space**, registered to the **MNI152 2009c asymmetrical template**.
Dataset Information#
Dataset ID |
|
Title |
TSS_iEEG |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2025 |
Authors |
James Kragel, Joel Voss |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{ds006065,
title = {TSS_iEEG},
author = {James Kragel and Joel Voss},
doi = {10.18112/openneuro.ds006065.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds006065.v1.0.0},
}
Found an issue with this dataset?
If you encounter any problems with this dataset (missing files, incorrect metadata, loading errors, etc.), please let us know!
Technical Details#
Subjects: 7
Recordings: 45
Tasks: 10
Channels: 168 (15), 175 (10), 82 (5), 68 (5), 181 (5), 43 (5)
Sampling rate (Hz): 500.0
Duration (hours): 10.699191111111112
Pathology: Surgery
Modality: Other
Type: Clinical/Intervention
Size on disk: 9.6 GB
File count: 45
Format: BIDS
License: CC0
DOI: doi:10.18112/openneuro.ds006065.v1.0.0
API Reference#
Use the DS006065 class to access this dataset programmatically.
- class eegdash.dataset.DS006065(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
Bases:
EEGDashDatasetTSS_iEEG
- Study:
ds006065(OpenNeuro)- Author (year):
Kragel2025- Canonical:
—
Also importable as:
DS006065,Kragel2025.Modality:
ieeg; Experiment type:Clinical/Intervention; Subject type:Surgery. Subjects: 7; recordings: 45; tasks: 10.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
- query#
Merged query with the dataset filter applied.
- Type:
dict
- records#
Metadata records used to build the dataset, if pre-fetched.
- Type:
list[dict] | None
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/ds006065 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds006065 DOI: https://doi.org/10.18112/openneuro.ds006065.v1.0.0
Examples
>>> from eegdash.dataset import DS006065 >>> dataset = DS006065(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset