DS005486#

PREDICT

Access recordings and metadata through EEGDash.

Citation: Nahian S. Chowdhury, Chuan Bi, Andrew J. Furman, Alan KI Chiang, Patrick Skippen, Emily Si, Samantha K Millard, Sarah M. Margerison, Darrah Spies, Michael L. Keaser, Joyce T. Da Silva, Shuo Chen, Siobhan M. Schabrun, David A. Seminowicz (2024). PREDICT. 10.18112/openneuro.ds005486.v1.0.1

Modality: eeg Subjects: 159 Recordings: 1782 License: CC0 Source: openneuro Citations: 0.0

Metadata: Complete (90%)

Quickstart#

Install

pip install eegdash

Access the data

from eegdash.dataset import DS005486

dataset = DS005486(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)

Filter by subject

dataset = DS005486(cache_dir="./data", subject="01")

Advanced query

dataset = DS005486(
    cache_dir="./data",
    query={"subject": {"$in": ["01", "02"]}},
)

Iterate recordings

for rec in dataset:
    print(rec.subject, rec.raw.info['sfreq'])

If you use this dataset in your research, please cite the original authors.

BibTeX

@dataset{ds005486,
  title = {PREDICT},
  author = {Nahian S. Chowdhury and Chuan Bi and Andrew J. Furman and Alan KI Chiang and Patrick Skippen and Emily Si and Samantha K Millard and Sarah M. Margerison and Darrah Spies and Michael L. Keaser and Joyce T. Da Silva and Shuo Chen and Siobhan M. Schabrun and David A. Seminowicz},
  doi = {10.18112/openneuro.ds005486.v1.0.1},
  url = {https://doi.org/10.18112/openneuro.ds005486.v1.0.1},
}

About This Dataset#

No README content is available for this dataset.

Dataset Information#

Dataset ID

DS005486

Title

PREDICT

Year

2024

Authors

Nahian S. Chowdhury, Chuan Bi, Andrew J. Furman, Alan KI Chiang, Patrick Skippen, Emily Si, Samantha K Millard, Sarah M. Margerison, Darrah Spies, Michael L. Keaser, Joyce T. Da Silva, Shuo Chen, Siobhan M. Schabrun, David A. Seminowicz

License

CC0

Citation / DOI

doi:10.18112/openneuro.ds005486.v1.0.1

Source links

OpenNeuro | NeMAR | Source URL
Copy-paste BibTeX
@dataset{ds005486,
  title = {PREDICT},
  author = {Nahian S. Chowdhury and Chuan Bi and Andrew J. Furman and Alan KI Chiang and Patrick Skippen and Emily Si and Samantha K Millard and Sarah M. Margerison and Darrah Spies and Michael L. Keaser and Joyce T. Da Silva and Shuo Chen and Siobhan M. Schabrun and David A. Seminowicz},
  doi = {10.18112/openneuro.ds005486.v1.0.1},
  url = {https://doi.org/10.18112/openneuro.ds005486.v1.0.1},
}

Found an issue with this dataset?

If you encounter any problems with this dataset (missing files, incorrect metadata, loading errors, etc.), please let us know!

Report an Issue on GitHub

Technical Details#

Subjects & recordings

  • Subjects: 159

  • Recordings: 1782

  • Tasks: 1

Channels & sampling rate

  • Channels: 66

  • Sampling rate (Hz): 5000.0 (798), 25000.0 (92)

  • Duration (hours): 0.0

Tags

  • Pathology: Not specified

  • Modality: —

  • Type: —

Files & format

  • Size on disk: 371.0 GB

  • File count: 1782

  • Format: BIDS

License & citation

  • License: CC0

  • DOI: doi:10.18112/openneuro.ds005486.v1.0.1

Provenance

API Reference#

Use the DS005486 class to access this dataset programmatically.

class eegdash.dataset.DS005486(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#

Bases: EEGDashDataset

OpenNeuro dataset ds005486. Modality: eeg; Experiment type: Unknown; Subject type: Unknown. Subjects: 159; recordings: 445; tasks: 1.

Parameters:

  • cache_dir (str | Path) – Directory where data are cached locally.

  • query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key dataset.

  • s3_bucket (str | None) – Base S3 bucket used to locate the data.

  • **kwargs (dict) – Additional keyword arguments forwarded to EEGDashDataset.

data_dir#

Local dataset cache directory (cache_dir / dataset_id).

Type:

Path

query#

Merged query with the dataset filter applied.

Type:

dict

records#

Metadata records used to build the dataset, if pre-fetched.

Type:

list[dict] | None

Notes

Each item is a recording; recording-level metadata are available via dataset.description. query supports MongoDB-style filters on fields in ALLOWED_QUERY_FIELDS and is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.

References

OpenNeuro dataset: https://openneuro.org/datasets/ds005486 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds005486

Examples

>>> from eegdash.dataset import DS005486
>>> dataset = DS005486(cache_dir="./data")
>>> recording = dataset[0]
>>> raw = recording.load()
__init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
save(path, overwrite=False)[source]#

Save the dataset to disk.

Parameters:

  • path (str or Path) – Destination file path.

  • overwrite (bool, default False) – If True, overwrite existing file.

Return type:

None

See Also#