DS004408: eeg dataset, 19 subjects#
EEG responses to continuous naturalistic speech
Citation: Giovanni M Di Liberto, Michael P Broderick, Ole Bialas, Edmund C Lalor (2015). EEG responses to continuous naturalistic speech. 10.18112/openneuro.ds004408.v1.0.8
19-participant EEG dataset — EEG responses to continuous naturalistic speech.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import DS004408
dataset = DS004408(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = DS004408(cache_dir="./data", subject="01")
Advanced query
dataset = DS004408(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{ds004408,
title = {EEG responses to continuous naturalistic speech},
author = {Giovanni M Di Liberto and Michael P Broderick and Ole Bialas and Edmund C Lalor},
doi = {10.18112/openneuro.ds004408.v1.0.8},
url = {https://doi.org/10.18112/openneuro.ds004408.v1.0.8},
}
About This Dataset#
The data in one study [^1] and then added to by another [^2] and contains EEG responses of healthy, neurotypical adults who listened to naturalistic speech. The subjects listened to segments from an audio book version of “The Old Man and the Sea” and their brain activity was recorded using a 128-channel ActiveTwo EEG system (BioSemi).
The stimuli folder contains .wav files of the presented audiobook segments as well as a .TextGrid file for each segment, containng the timing of words and phonemes in that segment. The text grids were generated using the forced-alignment software Prosodylab-Aligner [^3] and inspected by eye. Each subject’s folder contains one EEG-recording per audio segment and their starts are aligned (the EEG recordings are longer than the audio to a varying extent). The recordings are unfiltered, unreferenced and sampled at 512 Hz.
Cohort#
Dataset Statistics#
Channel counts: 128 ch (n=380 recordings)
Sampling frequencies: 512.0 Hz (n=380 recordings)
Total recording duration: 20 h 35 min
Signal · Electrodes & live trace#
Live trace viewer — sub-019 · task-listening · run-09
Showing one representative recording out of
19 subjects and 380 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 128 sensors — 128 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
EEG responses to continuous naturalistic speech |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
2015 |
Authors |
Giovanni M Di Liberto, Michael P Broderick, Ole Bialas, Edmund C Lalor |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{ds004408,
title = {EEG responses to continuous naturalistic speech},
author = {Giovanni M Di Liberto and Michael P Broderick and Ole Bialas and Edmund C Lalor},
doi = {10.18112/openneuro.ds004408.v1.0.8},
url = {https://doi.org/10.18112/openneuro.ds004408.v1.0.8},
}
API Reference#
eegdash.datasetEEGDashDatasetDS004408 · Liberto2023eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.DS004408(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
EEG responses to continuous naturalistic speech
- Study:
ds004408(OpenNeuro)- Author (year):
Liberto2023- Canonical:
—
Also importable as:
DS004408,Liberto2023.Modality:
eeg. Subjects: 19; recordings: 380; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/ds004408 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds004408 DOI: https://doi.org/10.18112/openneuro.ds004408.v1.0.8 NEMAR citation count: 1
Examples
>>> from eegdash.dataset import DS004408 >>> dataset = DS004408(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchdatasets.load_dataset("EEGDash/ds004408").huggingfaceSwap any load_dataset(...) call for ds004408 to reproduce the tutorial on this dataset.
Citation
Giovanni M Di Liberto, Michael P Broderick, Ole Bialas, Edmund C Lalor (2015). EEG responses to continuous naturalistic speech. 10.18112/openneuro.ds004408.v1.0.8
Provenance
¹Contributed to openneuro in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.18112/openneuro.ds004408.v1.0.8.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset