DS004148: eeg dataset, 60 subjects#
A test-retest resting and cognitive state EEG dataset
Citation: Yulin Wang, Wei Duan, Lihong Ding, Debo Dong, Xu Lei (20). A test-retest resting and cognitive state EEG dataset. 10.18112/openneuro.ds004148.v1.0.0
60-participant EEG dataset — A test-retest resting and cognitive state EEG dataset.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import DS004148
dataset = DS004148(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = DS004148(cache_dir="./data", subject="01")
Advanced query
dataset = DS004148(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{ds004148,
title = {A test-retest resting and cognitive state EEG dataset},
author = {Yulin Wang and Wei Duan and Lihong Ding and Debo Dong and Xu Lei},
doi = {10.18112/openneuro.ds004148.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds004148.v1.0.0},
}
About This Dataset#
This dataset contains resting(eyes closed, eyes open) and cognitive(subtraction, music, memory) state EEG recordings with 60 participants
during three experimental sessions together with sleep, emotion, mental health, and mind-wandering related measures
The data collection was initiated in September 2019 and was terminated in April 2021. The detailed description of the dataset is currently under working
by Yulin Wang, and will submit to Scientific Data for publication.
General information
EEG acquisition
EEG system (Brain Products GmbH, Steing- rabenstr, Germany, 64 electrodes)
Sampling frequency: 500Hz
Impedances were kept below 5k
Contact
If you have any questions or comments, please contact:
Xu Lei: xlei@swu.edu.cn
Yulin Wang: yulin.wang90.swu@gmail.com
Cohort#
Dataset Statistics#
Age distribution by gender (n=60, range 18–28 yr, mean 20.0 yr)
Sex composition
Channel counts: 61 ch (n=900 recordings)
Sampling frequencies: 500.0 Hz (n=900 recordings)
Total recording duration: 75 h
Signal · Electrodes & live trace#
Live trace viewer — sub-13 · ses-session1 · task-eyesopen
Showing one representative recording out of
60 subjects and 900 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 61 sensors — 61 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
A test-retest resting and cognitive state EEG dataset |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
20 |
Authors |
Yulin Wang, Wei Duan, Lihong Ding, Debo Dong, Xu Lei |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{ds004148,
title = {A test-retest resting and cognitive state EEG dataset},
author = {Yulin Wang and Wei Duan and Lihong Ding and Debo Dong and Xu Lei},
doi = {10.18112/openneuro.ds004148.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds004148.v1.0.0},
}
API Reference#
eegdash.datasetEEGDashDatasetDS004148 · Wang2022_test_retest_restingeegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.DS004148(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
A test-retest resting and cognitive state EEG dataset
- Study:
ds004148(OpenNeuro)- Author (year):
Wang2022_test_retest_resting- Canonical:
—
Also importable as:
DS004148,Wang2022_test_retest_resting.Modality:
eeg; Experiment type:Other; Subject type:Healthy. Subjects: 60; recordings: 900; tasks: 5.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/ds004148 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds004148 DOI: https://doi.org/10.18112/openneuro.ds004148.v1.0.0 NEMAR citation count: 12
Examples
>>> from eegdash.dataset import DS004148 >>> dataset = DS004148(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchdatasets.load_dataset("EEGDash/ds004148").huggingfaceSwap any load_dataset(...) call for ds004148 to reproduce the tutorial on this dataset.
Citation
Yulin Wang, Wei Duan, Lihong Ding, Debo Dong, Xu Lei (20). A test-retest resting and cognitive state EEG dataset. 10.18112/openneuro.ds004148.v1.0.0
Provenance
¹Contributed to openneuro in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.18112/openneuro.ds004148.v1.0.0.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset