DS004010: eeg dataset, 24 subjects#
MAVIS
Citation: Leonhard Waschke, Thomas Donoghue, Lorenz Fiedler, Sydney Smith, Douglas Garrett, Bradley Voytek, Jonas Obleser (—). MAVIS. 10.18112/openneuro.ds004010.v1.0.0
24-participant EEG dataset — MAVIS.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import DS004010
dataset = DS004010(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = DS004010(cache_dir="./data", subject="01")
Advanced query
dataset = DS004010(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{ds004010,
title = {MAVIS},
author = {Leonhard Waschke and Thomas Donoghue and Lorenz Fiedler and Sydney Smith and Douglas Garrett and Bradley Voytek and Jonas Obleser},
doi = {10.18112/openneuro.ds004010.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds004010.v1.0.0},
}
About This Dataset#
EEG data from 24 healthy participants performing a multisensory detection task was collected to investigate the dynamics of EEG activity during varying selective attention and the processing of sensory stimuli with distinct features. Participants detected targets in simultaneous audio-visual noise.
Cohort#
Dataset Statistics#
Age distribution (n=24, range 18–27 yr, mean 20.8 yr · sex per subject not reported)
Sex composition
Channel counts: 64 ch (n=24 recordings)
Sampling frequencies: 1000.0 Hz (n=24 recordings)
Total recording duration: 26 h
Signal · Electrodes & live trace#
Live trace viewer — sub-13 · task-MAVIS
Showing one representative recording out of
24 subjects and 24 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 64 sensors — 64 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
MAVIS |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
— |
Authors |
Leonhard Waschke, Thomas Donoghue, Lorenz Fiedler, Sydney Smith, Douglas Garrett, Bradley Voytek, Jonas Obleser |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{ds004010,
title = {MAVIS},
author = {Leonhard Waschke and Thomas Donoghue and Lorenz Fiedler and Sydney Smith and Douglas Garrett and Bradley Voytek and Jonas Obleser},
doi = {10.18112/openneuro.ds004010.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds004010.v1.0.0},
}
API Reference#
eegdash.datasetEEGDashDatasetDS004010 · Waschke2022eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.DS004010(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
MAVIS
- Study:
ds004010(OpenNeuro)- Author (year):
Waschke2022- Canonical:
—
Also importable as:
DS004010,Waschke2022.Modality:
eeg. Subjects: 24; recordings: 24; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/ds004010 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds004010 DOI: https://doi.org/10.18112/openneuro.ds004010.v1.0.0 NEMAR citation count: 0
Examples
>>> from eegdash.dataset import DS004010 >>> dataset = DS004010(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchdatasets.load_dataset("EEGDash/ds004010").huggingfaceSwap any load_dataset(...) call for ds004010 to reproduce the tutorial on this dataset.
Citation
Leonhard Waschke, Thomas Donoghue, Lorenz Fiedler, Sydney Smith, Douglas Garrett, … (n.d.). MAVIS. 10.18112/openneuro.ds004010.v1.0.0
Provenance
¹Contributed to openneuro in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.18112/openneuro.ds004010.v1.0.0.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset