DS004010: eeg dataset, 24 subjects#

MAVIS

Access recordings and metadata through EEGDash.

Citation: Leonhard Waschke, Thomas Donoghue, Lorenz Fiedler, Sydney Smith, Douglas Garrett, Bradley Voytek, Jonas Obleser (2022). MAVIS. 10.18112/openneuro.ds004010.v1.0.0

Modality: eeg Subjects: 24 Recordings: 24 License: CC0 Source: openneuro Citations: 0.0

Metadata: Complete (100%)

Quickstart#

Install

pip install eegdash

Access the data

from eegdash.dataset import DS004010

dataset = DS004010(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)

Filter by subject

dataset = DS004010(cache_dir="./data", subject="01")

Advanced query

dataset = DS004010(
    cache_dir="./data",
    query={"subject": {"$in": ["01", "02"]}},
)

Iterate recordings

for rec in dataset:
    print(rec.subject, rec.raw.info['sfreq'])

If you use this dataset in your research, please cite the original authors.

BibTeX

@dataset{ds004010,
  title = {MAVIS},
  author = {Leonhard Waschke and Thomas Donoghue and Lorenz Fiedler and Sydney Smith and Douglas Garrett and Bradley Voytek and Jonas Obleser},
  doi = {10.18112/openneuro.ds004010.v1.0.0},
  url = {https://doi.org/10.18112/openneuro.ds004010.v1.0.0},
}

About This Dataset#

EEG data from 24 healthy participants performing a multisensory detection task was collected to investigate the dynamics of EEG activity during varying selective attention and the processing of sensory stimuli with distinct features. Participants detected targets in simultaneous audio-visual noise.

Dataset Information#

Dataset ID

DS004010

Title

MAVIS

Author (year)

Waschke2022

Canonical

Importable as

DS004010, Waschke2022

Year

2022

Authors

Leonhard Waschke, Thomas Donoghue, Lorenz Fiedler, Sydney Smith, Douglas Garrett, Bradley Voytek, Jonas Obleser

License

CC0

Citation / DOI

doi:10.18112/openneuro.ds004010.v1.0.0

Source links

OpenNeuro | NeMAR | Source URL

Copy-paste BibTeX
@dataset{ds004010,
  title = {MAVIS},
  author = {Leonhard Waschke and Thomas Donoghue and Lorenz Fiedler and Sydney Smith and Douglas Garrett and Bradley Voytek and Jonas Obleser},
  doi = {10.18112/openneuro.ds004010.v1.0.0},
  url = {https://doi.org/10.18112/openneuro.ds004010.v1.0.0},
}

Found an issue with this dataset?

If you encounter any problems with this dataset (missing files, incorrect metadata, loading errors, etc.), please let us know!

Report an Issue on GitHub

Technical Details#

Subjects & recordings
  • Subjects: 24

  • Recordings: 24

  • Tasks: 1

Channels & sampling rate
  • Channels: 64

  • Sampling rate (Hz): 1000.0

  • Duration (hours): 26.45728861111111

Tags
  • Pathology: Not specified

  • Modality: —

  • Type: —

Files & format
  • Size on disk: 23.1 GB

  • File count: 24

  • Format: BIDS

License & citation
  • License: CC0

  • DOI: doi:10.18112/openneuro.ds004010.v1.0.0

Provenance

Electrode Layout#

Electrode layout — EEG · 64 sensors — 64 channels

Dataset Statistics#

Age distribution (n=24, range 18–27 yr)

152025

Sex distribution

15
9
Female  Male  Total: 24

Channel counts: 64 ch (n=24 recordings)

Sampling frequencies: 1000.0 Hz (n=24 recordings)

Total recording duration: 26 h

NEMAR Processing Statistics#

The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.

HED event descriptors word cloud HED event descriptors word cloud — DS004010

File Explorer#

Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.

Files:
Size:
Subjects:
Click to load file structure…

API Reference#

Use the DS004010 class to access this dataset programmatically.

class eegdash.dataset.DS004010(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#

Bases: EEGDashDataset

MAVIS

Study:

ds004010 (OpenNeuro)

Author (year):

Waschke2022

Canonical:

Also importable as: DS004010, Waschke2022.

Modality: eeg. Subjects: 24; recordings: 24; tasks: 1.

Parameters:
  • cache_dir (str | Path) – Directory where data are cached locally.

  • query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key dataset.

  • s3_bucket (str | None) – Base S3 bucket used to locate the data.

  • **kwargs (dict) – Additional keyword arguments forwarded to EEGDashDataset.

data_dir#

Local dataset cache directory (cache_dir / dataset_id).

Type:

Path

query#

Merged query with the dataset filter applied.

Type:

dict

records#

Metadata records used to build the dataset, if pre-fetched.

Type:

list[dict] | None

Notes

Each item is a recording; recording-level metadata are available via dataset.description. query supports MongoDB-style filters on fields in ALLOWED_QUERY_FIELDS and is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.

References

OpenNeuro dataset: https://openneuro.org/datasets/ds004010 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds004010 DOI: https://doi.org/10.18112/openneuro.ds004010.v1.0.0 NEMAR citation count: 0

Examples

>>> from eegdash.dataset import DS004010
>>> dataset = DS004010(cache_dir="./data")
>>> recording = dataset[0]
>>> raw = recording.load()
__init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
save(path: str, overwrite: bool = False, offset: int = 0)[source]#

Save datasets to files by creating one subdirectory for each dataset:

path/
    0/
        0-raw.fif | 0-epo.fif
        description.json
        raw_preproc_kwargs.json (if raws were preprocessed)
        window_kwargs.json (if this is a windowed dataset)
        window_preproc_kwargs.json  (if windows were preprocessed)
        target_name.json (if target_name is not None and dataset is raw)
    1/
        1-raw.fif | 1-epo.fif
        description.json
        raw_preproc_kwargs.json (if raws were preprocessed)
        window_kwargs.json (if this is a windowed dataset)
        window_preproc_kwargs.json  (if windows were preprocessed)
        target_name.json (if target_name is not None and dataset is raw)
Parameters:
  • path (str) –

    Directory in which subdirectories are created to store

    -raw.fif | -epo.fif and .json files to.

  • overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.

  • offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.

See Also#