DS003816: eeg dataset, 48 subjects#
The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect
Citation: SUN, Rui, Ven WONG, Goon Fui, GAO, Jungling (—). The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect. 10.18112/openneuro.ds003816.v1.0.1
48-participant EEG dataset — The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import DS003816
dataset = DS003816(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = DS003816(cache_dir="./data", subject="01")
Advanced query
dataset = DS003816(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{ds003816,
title = {The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect},
author = {SUN, Rui and Ven WONG, Goon Fui and GAO, Jungling},
doi = {10.18112/openneuro.ds003816.v1.0.1},
url = {https://doi.org/10.18112/openneuro.ds003816.v1.0.1},
}
About This Dataset#
This dataset contains Pre-rest ; Post-rest; Radiating LKM to Self; Radiating LKM to Other; Visualize Self and Visualize Other (eyes closed) states EEG and ECG recordings with 48 participants. Among of 48 participants, 15 participants were interested to participate as long-term practitioner. They were able to participate EEG and ECG data recording more than 10 times within two-month. For the rest of the participants recorded only once respectively.
High-density EEG and one channel ECG were collected simultaneously by a bio-signal amplifier (actiCHamp, Brain Products, German) from the 48 participants during the whole LKM training session with a sampling frequency of 1000 Hz. 128 EEG electrodes were fixed on the participant’s scalp according to the International 10-20 System. One ECG electrode was fixed on V3 lead. All Electrodes’ impedance was kept under 20kohm to maintain a good signal- to-noise ratio.
Cohort#
Dataset Statistics#
Channel counts: 128 ch (n=1077 recordings)
Sampling frequencies: 1000.0 Hz (n=1077 recordings)
Total recording duration: 161 h
Signal · Electrodes & live trace#
Live trace viewer — sub-33st · ses-01 · task-LKMSelf
Showing one representative recording out of
48 subjects and 1077 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
No scalp electrode layout is currently indexed for this dataset. Once the eegdash montage registry ingests it, the interactive viewer will appear here automatically.
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
— |
Authors |
SUN, Rui, Ven WONG, Goon Fui, GAO, Jungling |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{ds003816,
title = {The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect},
author = {SUN, Rui and Ven WONG, Goon Fui and GAO, Jungling},
doi = {10.18112/openneuro.ds003816.v1.0.1},
url = {https://doi.org/10.18112/openneuro.ds003816.v1.0.1},
}
API Reference#
eegdash.datasetEEGDashDatasetDS003816 · Sun2024eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.DS003816(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect
- Study:
ds003816(OpenNeuro)- Author (year):
Sun2024- Canonical:
—
Also importable as:
DS003816,Sun2024.Modality:
eeg. Subjects: 48; recordings: 1077; tasks: 8.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/ds003816 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds003816 DOI: https://doi.org/10.18112/openneuro.ds003816.v1.0.1
Examples
>>> from eegdash.dataset import DS003816 >>> dataset = DS003816(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchdatasets.load_dataset("EEGDash/ds003816").huggingface
Find datasets with the EEGDash APIQuery the catalogue, filter by task or modality, list candidates.
Load one EEG recordingResolve a single record to an MNE Raw with channels and events.
EEG recording to PyTorch DataLoaderWrap braindecode windows in a DataLoader for model training.
Preprocess EEG and create windowsFilter, resample, epoch — and persist the windowed dataset.
Save and reload prepared dataCache a windowed dataset to disk and reattach it without recompute.
Download a dataset locallyPrefetch BIDS files to a local cache and validate the layout.Swap any load_dataset(...) call for ds003816 to reproduce the tutorial on this dataset.
Citation
SUN, Rui, Ven WONG, Goon Fui, GAO, Jungling (n.d.). The Effect of Buddhism Derived Loving Kindness Meditation on Modulating EEG: Long-term and Short-term Effect. 10.18112/openneuro.ds003816.v1.0.1
Provenance
¹Contributed to openneuro in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.18112/openneuro.ds003816.v1.0.1.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset