DS004515: eeg dataset, 54 subjects#
EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants
Citation: Garima Singh, James F Cavanagh (20). EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants. 10.18112/openneuro.ds004515.v1.0.0
54-participant EEG dataset — EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants.
Quickstart#
Install
pip install eegdash
Access the data
from eegdash.dataset import DS004515
dataset = DS004515(cache_dir="./data")
# Get the raw object of the first recording
raw = dataset.datasets[0].raw
print(raw.info)
Filter by subject
dataset = DS004515(cache_dir="./data", subject="01")
Advanced query
dataset = DS004515(
cache_dir="./data",
query={"subject": {"$in": ["01", "02"]}},
)
Iterate recordings
for rec in dataset:
print(rec.subject, rec.raw.info['sfreq'])
If you use this dataset in your research, please cite the original authors.
BibTeX
@dataset{ds004515,
title = {EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants},
author = {Garima Singh and James F Cavanagh},
doi = {10.18112/openneuro.ds004515.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds004515.v1.0.0},
}
About This Dataset#
Affective state reinforcement learning task in N=54 Community participants. High and low drinkers. Data collected from 2019-2021 in the CRCL at UNM. The paper [Singh, G., Campbell, E., Hogeveen, J; Witkiewitz,K., Claus, E.D., & Cavanagh, J.F. Alcohol Imagery Boosts The Reward Positivity in Heavy Drinkers] Under review at the moment. Your best bet for understanding this task would be to read that paper first. - James F Cavanagh 08/02/2022
Cohort#
Dataset Statistics#
Age distribution by gender (n=54, range 18–55 yr, mean 38.0 yr)
Sex composition
Channel counts: 66 ch (n=54 recordings)
Sampling frequencies: 500.0 Hz (n=54 recordings)
Total recording duration: 20 h 36 min
Signal · Electrodes & live trace#
Live trace viewer — sub-021 · task-ProbabilisticSelection
Showing one representative recording out of
54 subjects and 54 recordings in this dataset.
Browse the full set on OpenNeuro;
drop any other _eeg.{set,edf,bdf,vhdr} file onto the
viewer (or pass ?eeg=<url>) to inspect it.
Electrode layout — EEG · 59 sensors — 59 channels
NEMAR Processing Statistics#
The plots below are generated by NEMAR’s automated EEG pipeline. The histogram shows pipeline success for data cleaning and ICA decomposition, the percentage of data frames and EEG channels retained after artefact removal, line noise per channel (RMS, dB), and the age/gender distribution of participants.
HED event descriptors word cloud
Manifest#
File Explorer#
Browse the BIDS file structure of this dataset. Records are fetched on demand from the EEGDash catalog the first time you open the explorer.
Full dataset metadata table
Dataset ID |
|
Title |
EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants |
Author (year) |
|
Canonical |
— |
Importable as |
|
Year |
20 |
Authors |
Garima Singh, James F Cavanagh |
License |
CC0 |
Citation / DOI |
|
Source links |
OpenNeuro | NeMAR | Source URL |
Copy-paste BibTeX
@dataset{ds004515,
title = {EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants},
author = {Garima Singh and James F Cavanagh},
doi = {10.18112/openneuro.ds004515.v1.0.0},
url = {https://doi.org/10.18112/openneuro.ds004515.v1.0.0},
}
API Reference#
eegdash.datasetEEGDashDatasetDS004515 · Singh2023eegdash/dataset/registry.py · [source ↗]- class eegdash.dataset.DS004515(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants
- Study:
ds004515(OpenNeuro)- Author (year):
Singh2023- Canonical:
—
Also importable as:
DS004515,Singh2023.Modality:
eeg. Subjects: 54; recordings: 54; tasks: 1.- Parameters:
cache_dir (str | Path) – Directory where data are cached locally.
query (dict | None) – Additional MongoDB-style filters to AND with the dataset selection. Must not contain the key
dataset.s3_bucket (str | None) – Base S3 bucket used to locate the data.
**kwargs (dict) – Additional keyword arguments forwarded to
EEGDashDataset.
- data_dir#
Local dataset cache directory (
cache_dir / dataset_id).- Type:
Path
Notes
Each item is a recording; recording-level metadata are available via
dataset.description.querysupports MongoDB-style filters on fields inALLOWED_QUERY_FIELDSand is combined with the dataset filter. Dataset-specific caveats are not provided in the summary metadata.References
OpenNeuro dataset: https://openneuro.org/datasets/ds004515 NeMAR dataset: https://nemar.org/dataexplorer/detail?dataset_id=ds004515 DOI: https://doi.org/10.18112/openneuro.ds004515.v1.0.0 NEMAR citation count: 4
Examples
>>> from eegdash.dataset import DS004515 >>> dataset = DS004515(cache_dir="./data") >>> recording = dataset[0] >>> raw = recording.load()
- __init__(cache_dir: str, query: dict | None = None, s3_bucket: str | None = None, **kwargs)[source]#
- save(path: str, overwrite: bool = False, offset: int = 0)[source]#
Save datasets to files by creating one subdirectory for each dataset:
path/ 0/ 0-raw.fif | 0-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw) 1/ 1-raw.fif | 1-epo.fif description.json raw_preproc_kwargs.json (if raws were preprocessed) window_kwargs.json (if this is a windowed dataset) window_preproc_kwargs.json (if windows were preprocessed) target_name.json (if target_name is not None and dataset is raw)
- Parameters:
path (str) –
- Directory in which subdirectories are created to store
-raw.fif | -epo.fif and .json files to.
overwrite (bool) – Whether to delete old subdirectories that will be saved to in this call.
offset (int) – If provided, the integer is added to the id of the dataset in the concat. This is useful in the setting of very large datasets, where one dataset has to be processed and saved at a time to account for its original position.
BaseDataset from braindecode — windowed via create_windows_from_events.braindecodeDataLoader; supports parallel workers and on-the-fly augmentations.pytorchdatasets.load_dataset("EEGDash/ds004515").huggingfaceSwap any load_dataset(...) call for ds004515 to reproduce the tutorial on this dataset.
Citation
Garima Singh, James F Cavanagh (20). EEG: Alcohol imagery reinforcement learning task with light and heavy drinker participants. 10.18112/openneuro.ds004515.v1.0.0
Provenance
¹Contributed to openneuro in BIDS format.
²Curated & ingested by the EEGDash catalog; see CITATION.cff for canonical reference.
³Persistent identifier: 10.18112/openneuro.ds004515.v1.0.0.
See Also#
eegdash.dataset.EEGDashDataseteegdash.dataset